Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversity (Q33299487)

25 July 2017

title

Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversity (English)

1 reference

25 July 2017

Zhongguo Xiong

7

0 references

author name string

Ziming Weng

1

1 reference

25 July 2017

Roger Barthelson

2

1 reference

25 July 2017

Siddarame Gowda

3

1 reference

25 July 2017

Mark E Hilf

4

1 reference

25 July 2017

William O Dawson

5

1 reference

25 July 2017

David W Galbraith

6

1 reference

25 July 2017

language of work or name

English

0 references

publication date

19 September 2007

1 reference

25 July 2017

1 reference

25 July 2017

volume

2

1 reference

25 July 2017

issue

9

1 reference

25 July 2017

page(s)

e917

1 reference

Creative Commons Attribution 4.0 International

25 July 2017

copyright license

start time

19 September 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Genetic Marker Analysis of a Global Collection of Isolates of Citrus tristeza virus: Characterization and Distribution of CTV Genotypes and Association with Symptoms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

The evolution of epidemic influenza.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

GeneChip resequencing of the smallpox virus genome can identify novel strains: a biodefense application

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Using a resequencing microarray as a multiple respiratory pathogen detection assay.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Identifying influenza viruses with resequencing microarrays.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Broad-spectrum respiratory tract pathogen identification using resequencing DNA microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Microarray-based resequencing of multiple Bacillus anthracis isolates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Evidence of multiple recombination events between two RNA sequence variants within a Citrus tristeza virus isolate.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Three distinct suppressors of RNA silencing encoded by a 20-kb viral RNA genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Tracking the evolution of the SARS coronavirus using high-throughput, high-density resequencing arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

The AU-rich RNA recombination hot spot sequence of Brome mosaic virus is functional in tombusviruses: implications for the mechanism of RNA recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Closterovirus bipolar virion: evidence for initiation of assembly by minor coat protein and its restriction to the genomic RNA 5' region

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Mechanism of RNA Recombination in Carmo- and Tombusviruses: Evidence for Template Switching by the RNA-Dependent RNA Polymerase In Vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

MrBayes 3: Bayesian phylogenetic inference under mixed models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

The p23 protein of citrus tristeza virus controls asymmetrical RNA accumulation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

High-throughput variation detection and genotyping using microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Recombination in the hemagglutinin gene of the 1918 "Spanish flu".

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Genetic variation of Citrus tristeza virus isolates from California and Spain: evidence for mixed infections and recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Factors regulating template switch in vitro by viral RNA-dependent RNA polymerases: implications for RNA-RNA recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Sequences of Citrus tristeza virus separated in time and space are essentially identical.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Molecular characterization of an isolate of citrus tristeza virus that causes severe symptoms in sweet orange

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Evidence that a plant virus switched hosts to infect a vertebrate and then recombined with a vertebrate-infecting virus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

An engineered closterovirus RNA replicon and analysis of heterologous terminal sequences for replication

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

The complete genome sequence of the major component of a mild citrus tristeza virus isolate

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Base-Calling of Automated Sequencer Traces UsingPhred. I. Accuracy Assessment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Transcriptional strategy of closteroviruses: mapping the 5' termini of the citrus tristeza virus subgenomic RNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

TreeView: an application to display phylogenetic trees on personal computers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Unusual sequence relationships between two isolates of citrus tristeza virus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

RNA recombination in animal and plant viruses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

Complete sequence of the citrus tristeza virus RNA genome

21 June 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

The complete nucleotide sequence of a severe stem pitting isolate of Citrus tristeza virus from Spain: comparison with isolates from different origins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

D-RNA molecules associated with subisolates of the VT strain of citrus tristeza virus which induce different seedling-yellows reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

The p20 gene product of Citrus tristeza virus accumulates in the amorphous inclusion bodies

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

Characterization of citrus tristeza virus subgenomic RNAs in infected tissue

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

Population structure and genetic diversity within California Citrus tristeza virus (CTV) isolates

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

Molecular variability of the 5'- and 3'-terminal regions of citrus tristeza virus RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

GENETIC DIVERSITY AND EVOLUTION OF CLOSTEROVIRUSES.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

Studies on functional interaction between brome mosaic virus replicase proteins during RNA recombination, using combined mutants in vivo and in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

Heterologous RNA replication enhancer stimulates in vitro RNA synthesis and template-switching by the carmovirus, but not by the tombusvirus, RNA-dependent RNA polymerase: implication for modular evolution of RNA viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

Detection of high levels of recombination generated during PCR amplification of RNA templates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

RDP2: recombination detection and analysis from sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

A phylogenetic survey of recombination frequency in plant RNA viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

Genotype classification and molecular evidence for the presence of mixed infections in Indian Citrus tristeza virus isolates

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1975466

A Dual Superinfection and Recombination Within HIV-1 Subtype B 12 Years After Primoinfection

31 October 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0000917

10.1371/JOURNAL.PONE.0000917

21 January 2018

Identifiers

DOI

1 reference

25 July 2017

0 references

1 reference

25 July 2017

1 reference