Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags (Q33281059)

25 July 2017

title

Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags (English)

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36

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33

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Jan Gorodkin

1

Jan Gorodkin

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Christian Bendixen

35

Christian Bendixen

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25 July 2017

Heng Li

16

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Claus B Jørgensen

Claus Jørgensen

6

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Jun Wang

Jun Wang

15

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Frank Panitz

Frank Panitz

5

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Bo Thomsen

Bo Thomsen

27

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Yang Huanming

34

Huanming Yang

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32

Lars Bolund

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22

Jun Yu

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17

Ruiqiang Li

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Susanna Cirera

2

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Jakob Hedegaard

3

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Michael J Gilchrist

4

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Karsten Scheibye-Knudsen

7

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Troels Arvin

8

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Steen Lumholdt

9

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Milena Sawera

10

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Trine Green

11

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Bente J Nielsen

12

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Jakob H Havgaard

13

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Carina Rosenkilde

14

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Bin Liu

18

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Wei Dong

20

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Wei Li

21

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Jian Wang

23

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Hans-Henrik Staefeldt

24

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Rasmus Wernersson

25

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Lone B Madsen

26

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Henrik Hornshøj

28

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Zhan Bujie

29

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Xuegang Wang

30

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Xuefei Wang

31

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language of work or name

English

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publication date

1 January 2007

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25 July 2017

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25 July 2017

volume

8

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25 July 2017

issue

4

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25 July 2017

page(s)

R45

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describes a project that uses

25 July 2017

SQL

1 reference

26 June 2022

https://europepmc.org/article/PMC/PMC1895994

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences

21 June 2018

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21 June 2018

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Transcriptomic analyses support the similarity of gene expression between brain and testis in human as well as mouse

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Can Zipf's law be adapted to normalize microarrays?

21 June 2018

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Gene identification and expression analysis of 86,136 Expressed Sequence Tags (EST) from the rice genome

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags

21 June 2018

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Defining a large set of full-length clones from a Xenopus tropicalis EST project

21 June 2018

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Integrative annotation of 21,037 human genes validated by full-length cDNA clones

21 June 2018

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A gene atlas of the mouse and human protein-encoding transcriptomes

21 June 2018

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21 June 2018

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In silico analysis indicates a similar gene expression pattern between human brain and testis

21 June 2018

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21 June 2018

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The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology

21 June 2018

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21 June 2018

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Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

21 June 2018

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A comprehensive collection of chicken cDNAs

21 June 2018

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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

21 June 2018

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21 June 2018

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21 June 2018

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The contribution of 700,000 ORF sequence tags to the definition of the human transcriptome.

21 June 2018

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CROC-4: a novel brain specific transcriptional activator of c-fos expressed from proliferation through to maturation of multiple neuronal cell types.

21 June 2018

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21 June 2018

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A large scale analysis of cDNA in Arabidopsis thaliana: generation of 12,028 non-redundant expressed sequence tags from normalized and size-selected cDNA libraries

21 June 2018

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Gene ontology: tool for the unification of biology

21 June 2018

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Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Primer3 on the WWW for general users and for biologist programmers

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Large-scale statistical analyses of rice ESTs reveal correlated patterns of gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Cluster analysis and display of genome-wide expression patterns

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Base-Calling of Automated Sequencer Traces UsingPhred. I. Accuracy Assessment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

The significance of digital gene expression profiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Generation and analysis of 280,000 human expressed sequence tags

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

A comprehensive map of the porcine genome

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Increased cloning efficiency by temperature-cycle ligation.

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

Comparative analysis of the Arabidopsis and rice expressed sequence tag (EST) sets.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895994

A first-generation EST RH comparative map of the porcine and human genome

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17407547

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2007-8-4-R45

1 reference

Dimensions Publication ID

25 July 2017

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1 reference

25 July 2017

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