Building native protein conformation from highly approximate backbone torsion angles (Q33226011)

24 July 2017

title

Building native protein conformation from highly approximate backbone torsion angles (English)

1 reference

24 July 2017

3

George D Rose

1 reference

24 July 2017

2

Patrick J Fleming

1 reference

24 July 2017

Haipeng Gong

1

1 reference

24 July 2017

language of work or name

English

0 references

publication date

26 October 2005

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24 July 2017

number of pages

6

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Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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24 July 2017

volume

102

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24 July 2017

issue

45

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24 July 2017

page(s)

16227-16232

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Sterics and solvation winnow accessible conformational space for unfolded proteins

24 July 2017

cites work

1 reference

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Statistical coil model of the unfolded state: resolving the reconciliation problem

14 July 2018

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Helix, sheet, and polyproline II frequencies and strong nearest neighbor effects in a restricted coil library

14 July 2018

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The effect of long-range interactions on the secondary structure formation of proteins

14 July 2018

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Do all backbone polar groups in proteins form hydrogen bonds?

14 July 2018

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Sensitivity of NMR residual dipolar couplings to perturbations in folded and denatured staphylococcal nuclease

14 July 2018

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The Protein Coil Library: a structural database of nonhelix, nonstrand fragments derived from the PDB.

14 July 2018

1 reference

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Reassessing random-coil statistics in unfolded proteins

14 July 2018

1 reference

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Random-coil behavior and the dimensions of chemically unfolded proteins

14 July 2018

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Prediction of protein tertiary structure using PROFESY, a novel method based on fragment assembly and conformational space annealing

14 July 2018

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Some fundamental aspects of building protein structures from fragment libraries.

14 July 2018

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Heterogeneity and inaccuracy in protein structures solved by X-ray crystallography.

14 July 2018

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Close agreement between the orientation dependence of hydrogen bonds observed in protein structures and quantum mechanical calculations

14 July 2018

1 reference

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Ab initio protein folding using LINUS.

14 July 2018

1 reference

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Open source clustering software

14 July 2018

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Steric restrictions in protein folding: an alpha-helix cannot be followed by a contiguous beta-strand

14 July 2018

1 reference

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Stereochemistry of polypeptide chain configurations

14 July 2018

1 reference

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14 July 2018

1 reference

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In search of the energetic role of peptide hydrogen bonds

14 July 2018

1 reference

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Determinants of the polyproline II helix from modeling studies

14 July 2018

1 reference

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Is polyproline II a major backbone conformation in unfolded proteins?

14 July 2018

1 reference

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The expanded denatured state: an ensemble of conformations trapped in a locally encoded topological space

14 July 2018

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A simple model for polyproline II structure in unfolded states of alanine-based peptides

14 July 2018

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Polyproline II structure in a sequence of seven alanine residues.

14 July 2018

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Polyproline II helical structure in protein unfolded states: lysine peptides revisited

14 July 2018

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Rosetta in CASP4: progress in ab initio protein structure prediction

14 July 2018

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Study of conformational rearrangement and refinement of structural homology models by the use of heteronuclear dipolar couplings

14 July 2018

1 reference

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The Flory isolated-pair hypothesis is not valid for polypeptide chains: implications for protein folding

14 July 2018

1 reference

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Are denatured proteins ever random coils?

14 July 2018

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14 July 2018

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A physical basis for protein secondary structure

14 July 2018

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Protein backbone angle restraints from searching a database for chemical shift and sequence homology

14 July 2018

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Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions

14 July 2018

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Principles that govern the folding of protein chains

14 July 2018

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Areas, volumes, packing and protein structure

14 July 2018

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Are proteins made from a limited parts list?

14 July 2018

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Persistence of native-like topology in a denatured protein in 8 M urea

21 January 2018

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On the origin of residual dipolar couplings from denatured proteins

21 January 2018

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Polyproline II helix is the preferred conformation for unfolded polyalanine in water

21 January 2018

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Reconciling observations of sequence-specific conformational propensities with the generic polymeric behavior of denatured proteins

21 January 2018

1 reference

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Intrinsic phi, psi propensities of amino acids, derived from the coil regions of known structures

21 January 2018

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Equation of State Calculations by Fast Computing Machines

21 January 2018

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An orientation-dependent hydrogen bonding potential improves prediction of specificity and structure for proteins and protein-protein complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0508415102

Optimizing physical energy functions for protein folding

21 January 2018

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https://api.crossref.org/works/10.1073/PNAS.0508415102

De Novo Prediction of Three-dimensional Structures for Major Protein Families

21 January 2018

1 reference

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Circular dichroism of poly-L-proline in an unordered conformation

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16251268

12 December 2020

inferred from PubMed ID database lookup

Protein folding: Evaluation of some simple rules for the assembly of helices into tertiary structures with myoglobin as an example

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16251268

12 December 2020

inferred from PubMed ID database lookup

Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16251268

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.0508415102

1 reference

24 July 2017

0 references

1 reference

24 July 2017

1 reference