Regulators associated with clinical outcomes revealed by DNA methylation data in breast cancer (Q30956005)

25 September 2017

Regulators associated with clinical outcomes revealed by DNA methylation data in breast cancer (English)

1 reference

25 September 2017

0 references

Matthew H Ung

1

1 reference

25 September 2017

Frederick S Varn

series ordinal

2

1 reference

25 September 2017

Shaoke Lou

series ordinal

3

1 reference

25 September 2017

Chao Cheng

series ordinal

4

1 reference

25 September 2017

21 May 2015

1 reference

PLOS Computational Biology

25 September 2017

1 reference

25 September 2017

11

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25 September 2017

5

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25 September 2017

e1004269

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Creative Commons Attribution 4.0 International

25 September 2017

start time

21 May 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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DNA methylation presents distinct binding sites for human transcription factors

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Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4 T-cell populations

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Passive and active DNA methylation and the interplay with genetic variation in gene regulation

21 June 2018

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GATA3 acts upstream of FOXA1 in mediating ESR1 binding by shaping enhancer accessibility

21 June 2018

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Genome and transcriptome sequencing in prospective metastatic triple-negative breast cancer uncovers therapeutic vulnerabilities

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21 June 2018

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21 June 2018

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Functions of DNA methylation: islands, start sites, gene bodies and beyond

21 June 2018

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DNA methylation profiling distinguishes three clusters of breast cancer cell lines

21 June 2018

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Inflammation, DNA methylation and colitis-associated cancer

21 June 2018

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TCF12 protein functions as transcriptional repressor of E-cadherin, and its overexpression is correlated with metastasis of colorectal cancer

21 June 2018

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Genomic Imprinting: A Mammalian Epigenetic Discovery Model

21 June 2018

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DNA methylation profiling reveals a predominant immune component in breast cancers.

21 June 2018

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Genome-scale analysis of aberrant DNA methylation in colorectal cancer

21 June 2018

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Genome-wide analysis reveals PADI4 cooperates with Elk-1 to activate c-Fos expression in breast cancer cells.

21 June 2018

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21 June 2018

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Pro-oncogene Pokemon promotes breast cancer progression by upregulating survivin expression

21 June 2018

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Integrated analysis of gene expression, CpG island methylation, and gene copy number in breast cancer cells by deep sequencing

21 June 2018

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Epidermal growth factor regulates Mcl-1 expression through the MAPK-Elk-1 signalling pathway contributing to cell survival in breast cancer

21 June 2018

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FOXA1 is a key determinant of estrogen receptor function and endocrine response

21 June 2018

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Epigenetic modifications in pluripotent and differentiated cells

21 June 2018

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FOXA1 is an essential determinant of ERalpha expression and mammary ductal morphogenesis

21 June 2018

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DNA methylation as a biomarker for cardiovascular disease risk

21 June 2018

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An atlas of combinatorial transcriptional regulation in mouse and man

21 June 2018

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Breast cancer subtypes and the risk of local and regional relapse.

21 June 2018

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General transcription factor binding at CpG islands in normal cells correlates with resistance to de novo DNA methylation in cancer cells

21 June 2018

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The neurofibromatosis type 1 tumor suppressor controls cell growth by regulating signal transducer and activator of transcription-3 activity in vitro and in vivo.

21 June 2018

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ZNF238 is expressed in postmitotic brain cells and inhibits brain tumor growth

21 June 2018

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DNA methylation signatures identify biologically distinct subtypes in acute myeloid leukemia.

21 June 2018

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Epithelial to mesenchymal transition and breast cancer.

21 June 2018

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Quantitative DNA methylation predicts survival in adult acute myeloid leukemia

21 June 2018

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Multicenter study using paraffin-embedded tumor tissue testing PITX2 DNA methylation as a marker for outcome prediction in tamoxifen-treated, node-negative breast cancer patients

21 June 2018

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DNA hypermethylation and clinicopathological features in breast cancer: the Western New York Exposures and Breast Cancer (WEB) Study

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440643

Positive cross-regulatory loop ties GATA-3 to estrogen receptor alpha expression in breast cancer

21 June 2018

1 reference

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Stability and flexibility of epigenetic gene regulation in mammalian development

21 June 2018

1 reference

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Quantifying similarity between motifs

21 June 2018

1 reference

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Gain of function of mutant p53: the mutant p53/NF-Y protein complex reveals an aberrant transcriptional mechanism of cell cycle regulation

21 June 2018

1 reference

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Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440643

Role of the proto-oncogene Pokemon in cellular transformation and ARF repression

21 June 2018

1 reference

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Human protein reference database as a discovery resource for proteomics

21 June 2018

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DNA methylation and autoimmune disease

21 June 2018

1 reference

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TRANSFAC: transcriptional regulation, from patterns to profiles

21 June 2018

1 reference

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DNA methylation has a local effect on transcription and histone acetylation

21 June 2018

1 reference

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Aberrant patterns of DNA methylation, chromatin formation and gene expression in cancer

21 June 2018

1 reference

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Molecular portraits of human breast tumours

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440643

p53 and human cancer: the first ten thousand mutations.

21 June 2018

1 reference

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Cytosine methylation and the ecology of intragenomic parasites

21 June 2018

1 reference

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Aberrant regulation of ras proteins in malignant tumour cells from type 1 neurofibromatosis patients

21 June 2018

1 reference

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X inactivation, differentiation, and DNA methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440643

DNA methylation and epigenetic control of cellular differentiation.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1004269

DNA methylation profiles define stem cell identity and reveal a tight embryonic-extraembryonic lineage boundary

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1004269

DNA methylation markers predict outcome in node-positive, estrogen receptor-positive breast cancer with adjuvant anthracycline-based chemotherapy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1004269

The role of DNA methylation in setting up chromatin structure during development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1004269

Cdk2-dependent phosphorylation of the NF-Y transcription factor is essential for the expression of the cell cycle-regulatory genes and cell cycle G1/S and G2/M transitions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1004269

Sp1 transcription factor binds DNA and activates transcription even when the binding site is CpG methylated

21 January 2018

1 reference

12 December 2020

Molecular biology. Epigenetic islands in a genetic ocean

1 reference

12 December 2020

[Propentofylline and its analogs: a new class of agents for in vitro study of the antidiuretic response]

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12 December 2020

Distinct hypermethylation profile of primary breast cancer is associated with sentinel lymph node metastasis

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.1004269

Identifiers

DOI

1 reference

25 September 2017

journals/ploscb/UngVLC15

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

25 September 2017

PubMed publication ID

25996148

1 reference