Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus (Q30946870)

13 October 2017

Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus (English)

1 reference

13 October 2017

8

1 reference

PubMed publication ID

27 June 2017

Christel Krueger

7

0 references

Adele Murrell

object named as

Adele Murrell

10

0 references

author name string

Raffaella Nativio

1

1 reference

13 October 2017

Kerstin S Wendt

2

1 reference

13 October 2017

Yoko Ito

3

1 reference

13 October 2017

Joanna E Huddleston

4

1 reference

13 October 2017

Santiago Uribe-Lewis

5

1 reference

13 October 2017

Kathryn Woodfine

6

1 reference

13 October 2017

Jan-Michael Peters

9

1 reference

13 October 2017

26 November 2009

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13 October 2017

1 reference

13 October 2017

5

1 reference

13 October 2017

11

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13 October 2017

e1000739

1 reference

Creative Commons Attribution 4.0 International

13 October 2017

start time

26 November 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Architectural roles of multiple chromatin insulators at the human apolipoprotein gene cluster

21 June 2018

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How cohesin and CTCF cooperate in regulating gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

The cohesin complex and its roles in chromosome biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

CTCF regulates allelic expression of Igf2 by orchestrating a promoter-polycomb repressive complex 2 intrachromosomal loop

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Xist RNA is confined to the nuclear territory of the silenced X chromosome throughout the cell cycle

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Three-dimensional conformation at the H19/Igf2 locus supports a model of enhancer tracking

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

CTCF physically links cohesin to chromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Somatically acquired hypomethylation of IGF2 in breast and colorectal cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Distinct methylation changes at the IGF2-H19 locus in congenital growth disorders and cancer.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

A complex deoxyribonucleic acid looping configuration associated with the silencing of the maternal Igf2 allele

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Cohesins functionally associate with CTCF on mammalian chromosome arms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Cohesin mediates transcriptional insulation by CCCTC-binding factor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

We gather together: insulators and genome organization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Quantitative analysis of chromosome conformation capture assays (3C-qPCR).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Analysis of the H19ICR insulator

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Mutations in cohesin complex members SMC3 and SMC1A cause a mild variant of cornelia de Lange syndrome with predominant mental retardation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Roles of the sister chromatid cohesion apparatus in gene expression, development, and human syndromes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

High throughput detection of M6P/IGF2R intronic hypermethylation and LOH in ovarian cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

An enhancer element at the Igf2/H19 locus drives gene expression in both imprinted and non-imprinted tissues.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Cornelia de Lange syndrome is caused by mutations in NIPBL, the human homolog of Drosophila melanogaster Nipped-B

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

NIPBL, encoding a homolog of fungal Scc2-type sister chromatid cohesion proteins and fly Nipped-B, is mutated in Cornelia de Lange syndrome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Looping and interaction between hypersensitive sites in the active beta-globin locus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

An evolutionarily conserved putative insulator element near the 3' boundary of the imprinted Igf2/H19 domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

A skeletal muscle-specific mouse Igf2 repressor lies 40 kb downstream of the gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Comparative genomic sequencing identifies novel tissue-specific enhancers and sequence elements for methylation-sensitive factors implicated in Igf2/H19 imprinting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Nipped-B, a Drosophila homologue of chromosomal adherins, participates in activation by remote enhancers in the cut and Ultrabithorax genes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

The boundaries of the silenced HMR domain in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Transcriptional and post-transcriptional regulation of the human IGF-II gene expression.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

Comparative analysis of Igf-2/H19 imprinted domain: identification of a highly conserved intergenic DNase I hypersensitive region.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2776306

The cohesin ring concatenates sister DNA molecules

21 June 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Cell-type-specific TEV protease cleavage reveals cohesin functions in Drosophila neurons

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

piggyBac-based mosaic screen identifies a postmitotic function for cohesin in regulating developmental axon pruning

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Genomic imprinting and cancer: from primordial germ cells to somatic cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Maternal-specific footprints at putative CTCF sites in the H19 imprinting control region give evidence for insulator function.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Interaction between differentially methylated regions partitions the imprinted genes Igf2 and H19 into parent-specific chromatin loops

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Imprinting of IGF2 P0 transcript and novel alternatively spliced INS-IGF2 isoforms show differences between mouse and human.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Altered gene expression and methylation of the human chromosome 11 imprinted region in small for gestational age (SGA) placentae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

The three 'C' s of chromosome conformation capture: controls, controls, controls.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Examination of IGF2 and H19 loss of imprinting in bladder cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Loss of Igf2 imprinting in monoclonal mouse hepatic tumor cells is not associated with abnormal methylation patterns for the H19, Igf2, and Kvlqt1 differentially methylated regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

CTCF binding at the insulin-like growth factor-II (IGF2)/H19 imprinting control region is insufficient to regulate IGF2/H19 expression in human tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

De novo quantitative bisulfite sequencing using the pyrosequencing technology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Promoter-Dependent Tissue-Specific Expressive Nature of Imprinting Gene, Insulin-like Growth Factor II, in Human Tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1000739

Loss of imprinting in colorectal cancer linked to hypomethylation of H19 and IGF2

21 January 2018

1 reference

12 December 2020

Frequent IGF2/H19 domain epigenetic alterations and elevated IGF2 expression in epithelial ovarian cancer

1 reference

12 December 2020

Mapping chromatin interactions by chromosome conformation capture

1 reference

12 December 2020

Hypomethylated and hypermethylated profiles of H19DMR are associated with the aberrant imprinting of IGF2 and H19 in human hepatocellular carcinoma

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.1000739

Identifiers

DOI

1 reference

13 October 2017

1 reference

13 October 2017

PubMed publication ID

19956766

1 reference