RNA biochemistry. Determination of in vivo target search kinetics of regulatory noncoding RNA. (Q30643654)

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3 March 2020

title

RNA biochemistry. Determination of in vivo target search kinetics of regulatory noncoding RNA (English)

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3 March 2020

2

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3 March 2020

Taekjip Ha

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3 March 2020

1

Jingyi Fei

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3

Qiucen Zhang

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3 March 2020

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Seongjin Park

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3 March 2020

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author name string

Divya Balasubramanian

5

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3 March 2020

Ido Golding

6

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3 March 2020

Carin K Vanderpool

7

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3 March 2020

language of work or name

English

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publication date

1 March 2015

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3 March 2020

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3 March 2020

volume

347

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3 March 2020

issue

6228

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3 March 2020

page(s)

1371-1374

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RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts

3 March 2020

cites work

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20 June 2018

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Physiological consequences of multiple-target regulation by the small RNA SgrS in Escherichia coli

20 June 2018

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Break-induced replication: functions and molecular mechanism

20 June 2018

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Regulating the many to benefit the few: role of weak small RNA targets.

20 June 2018

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The role of miRNAs in regulating gene expression networks

20 June 2018

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Single-cell systems biology by super-resolution imaging and combinatorial labeling

20 June 2018

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RNA-guided genetic silencing systems in bacteria and archaea

20 June 2018

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Regulation by small RNAs in bacteria: expanding frontiers

20 June 2018

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Hfq and its constellation of RNA

20 June 2018

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Dynamic competition of DsrA and rpoS fragments for the proximal binding site of Hfq as a means for efficient annealing

20 June 2018

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The small RNA SgrS controls sugar-phosphate accumulation by regulating multiple PTS genes

20 June 2018

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Disruption of small RNA signaling caused by competition for Hfq

20 June 2018

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RNAs actively cycle on the Sm-like protein Hfq.

20 June 2018

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Characterization of homologs of the small RNA SgrS reveals diversity in function

20 June 2018

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Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution

20 June 2018

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Imaging individual mRNA molecules using multiple singly labeled probes

20 June 2018

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The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410144

Quantitative characteristics of gene regulation by small RNA

20 June 2018

1 reference

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Probing transcription factor dynamics at the single-molecule level in a living cell

20 June 2018

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Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA.

20 June 2018

1 reference

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Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by Hfq

20 June 2018

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RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs

20 June 2018

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Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system

20 June 2018

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Expression of the glucose transporter gene, ptsG, is regulated at the mRNA degradation step in response to glycolytic flux in Escherichia coli

20 June 2018

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Enolase in the RNA degradosome plays a crucial role in the rapid decay of glucose transporter mRNA in the response to phosphosugar stress in Escherichia coli

20 June 2018

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1258849

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

21 January 2018

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https://api.crossref.org/works/10.1126/SCIENCE.1258849

General properties of transcriptional time series in Escherichia coli

21 January 2018

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Enzymatic oxygen scavenging for photostability without pH drop in single-molecule experiments.

21 January 2018

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Three-dimensional super-resolution imaging by stochastic optical reconstruction microscopy

21 January 2018

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Characterization and application of single fluorescent nanodiamonds as cellular biomarkers

21 January 2018

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Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM)

21 January 2018

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A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator

21 January 2018

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Small RNA binding-site multiplicity involved in translational regulation of a polycistronic mRNA.

21 January 2018

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cAMP receptor protein–cAMP plays a crucial role in glucose–lactose diauxie by activating the major glucose transporter gene in Escherichia coli

21 January 2018

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Hfq structure, function and ligand binding

21 January 2018

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Deciphering the interplay between two independent functions of the small RNA regulator SgrS in Salmonella

21 January 2018

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A dual function for a bacterial small RNA: SgrS performs base pairing-dependent regulation and encodes a functional polypeptide

21 January 2018

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rRNA transcription and growth rate-dependent regulation of ribosome synthesis in Escherichia coli

21 January 2018

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Near-critical phenomena in intracellular metabolite pools

21 January 2018

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Hfq binding at RhlB‐recognition region of RNase E is crucial for the rapid degradation of target mRNAs mediated by sRNAs in Escherichia coli

21 January 2018

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Proteins associated with RNase E in a multicomponent ribonucleolytic complex

21 January 2018

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Combinatorial transcriptional control of the lactose operon of Escherichia coli

21 January 2018

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VMD: visual molecular dynamics

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1126/SCIENCE.1258849

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25792329 AND SRC:MED&resulttype=core&format=json

3 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25792329 AND SRC:MED&resulttype=core&format=json

3 March 2020

PubMed publication ID

25792329

1 reference