A strand-specific switch in noncoding transcription switches the function of a Polycomb/Trithorax response element (Q30609330)

19 October 2017

A strand-specific switch in noncoding transcription switches the function of a Polycomb/Trithorax response element (English)

1 reference

19 October 2017

8

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19 October 2017

Helena Okulski

4

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Johanna Trupke

object named as

Johanna Trupke

3

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Andrew Dimond

object named as

Andrew Dimond

13

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author name string

Veronika A Herzog

1

1 reference

19 October 2017

Adelheid Lempradl

2

1 reference

19 October 2017

Christina Altmutter

5

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19 October 2017

Frank Ruge

6

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19 October 2017

Bernd Boidol

7

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19 October 2017

Gerald Schmauss

9

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19 October 2017

Karin Aumayr

10

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19 October 2017

Marius Ruf

11

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19 October 2017

Andrew Pospisilik

12

1 reference

19 October 2017

Hasene Basak Senergin

14

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19 October 2017

Marcus L Vargas

15

1 reference

19 October 2017

Jeffrey A Simon

16

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19 October 2017

Leonie Ringrose

17

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19 October 2017

language of work or name

English

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publication date

10 August 2014

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19 October 2017

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19 October 2017

46

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19 October 2017

9

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19 October 2017

973-981

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describes a project that uses

19 October 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4270207/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Regulatory interactions between RNA and polycomb repressive complex 2.

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What are memories made of? How Polycomb and Trithorax proteins mediate epigenetic memory

20 June 2018

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Gene regulation by antisense transcription

20 June 2018

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PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells.

20 June 2018

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Elements of the polycomb repressor SU(Z)12 needed for histone H3-K27 methylation, the interface with E(Z), and in vivo function

20 June 2018

1 reference

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Transcriptional regulation by Polycomb group proteins

20 June 2018

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Promiscuous RNA binding by Polycomb repressive complex 2.

20 June 2018

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Quantitative in vivo analysis of chromatin binding of Polycomb and Trithorax group proteins reveals retention of ASH1 on mitotic chromatin.

20 June 2018

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Noncoding RNA and Polycomb recruitment.

20 June 2018

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A modular toolset for recombination transgenesis and neurogenetic analysis of Drosophila

20 June 2018

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Flowering time control: another window to the connection between antisense RNA and chromatin.

20 June 2018

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Intronic RNAs mediate EZH2 regulation of epigenetic targets

20 June 2018

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A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression

20 June 2018

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Quantitative analysis of polycomb response elements (PREs) at identical genomic locations distinguishes contributions of PRE sequence and genomic environment.

20 June 2018

1 reference

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RNA templating the epigenome: long noncoding RNAs as molecular scaffolds

20 June 2018

1 reference

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Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

20 June 2018

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Polycomb preferentially targets stalled promoters of coding and noncoding transcripts

20 June 2018

1 reference

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Genome-wide analysis of promoter architecture in Drosophila melanogaster.

20 June 2018

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Genome-wide identification of polycomb-associated RNAs by RIP-seq

20 June 2018

1 reference

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Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2.

20 June 2018

1 reference

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Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells

20 June 2018

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Enzymatic assembly of DNA molecules up to several hundred kilobases

20 June 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

20 June 2018

1 reference

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Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

20 June 2018

1 reference

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Alternative requirements for Vestigial, Scalloped, and Dmef2 during muscle differentiation in Drosophila melanogaster

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome

20 June 2018

1 reference

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Vestigial expression in the Drosophila embryonic central nervous system

20 June 2018

1 reference

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Integration of external signaling pathways with the core transcriptional network in embryonic stem cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

A genome-wide transgenic RNAi library for conditional gene inactivation in Drosophila

20 June 2018

1 reference

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Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

20 June 2018

1 reference

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RIP-Chip: the isolation and identification of mRNAs, microRNAs and protein components of ribonucleoprotein complexes from cell extracts.

20 June 2018

1 reference

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Polycomb response elements and targeting of Polycomb group proteins in Drosophila.

20 June 2018

1 reference

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jPREdictor: a versatile tool for the prediction of cis-regulatory elements

20 June 2018

1 reference

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Genome-wide analysis of Polycomb targets in Drosophila melanogaster

20 June 2018

1 reference

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Suppression of Polycomb group proteins by JNK signalling induces transdetermination in Drosophila imaginal discs

20 June 2018

1 reference

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Bioconductor: open software development for computational biology and bioinformatics

20 June 2018

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Integrated analysis of the genome and the transcriptome by FANTOM.

20 June 2018

1 reference

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Transcription cofactor Vgl-2 is required for skeletal muscle differentiation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

Binding of trithorax and Polycomb proteins to the bithorax complex: dynamic changes during early Drosophila embryogenesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

The Drosophila Enhancer of zeste gene encodes a chromosomal protein: examination of wild-type and mutant protein distribution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

Cell cycling and patterned cell proliferation in the wing primordium of Drosophila.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

Organization of wing formation and induction of a wing-patterning gene at the dorsal/ventral compartment boundary.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

The embryonic development of larval muscles in Drosophila.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

Control of Drosophila wing and haltere development by the nuclear vestigial gene product

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

Non-coding RNAs in polycomb/trithorax regulation.

20 June 2018

1 reference

Control of apterous by vestigial drives indirect flight muscle development in Drosophila

21 January 2018

1 reference

Enhancer-PRE communication contributes to the expansion of gene expression domains in proliferating primordia.

21 January 2018

1 reference

Dynamic regulation by polycomb group protein complexes controls pattern formation and the cell cycle in Drosophila.

21 January 2018

1 reference

The role of Polycomb-group response elements in regulation of engrailed transcription in Drosophila

21 January 2018

1 reference

Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila.

21 January 2018

1 reference

Integration of positional signals and regulation of wing formation and identity by Drosophila vestigial gene.

21 January 2018

1 reference

Model for the regulation of size in the wing imaginal disc of Drosophila

21 January 2018

1 reference

MULTOVL: fast multiple overlaps of genomic regions.

21 January 2018

1 reference

Allocation of the thoracic imaginal primordia in the Drosophila embryo.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270207

25 November 2018

Identifiers

DOI

10.1038/NG.3058

1 reference

Dimensions Publication ID

19 October 2017

0 references

1 reference

19 October 2017

PubMed publication ID

25108384

1 reference