Biofilm responses to smooth flow fields and chemical gradients in novel microfluidic flow cells (Q30570448)

20 August 2017

Biofilm responses to smooth flow fields and chemical gradients in novel microfluidic flow cells (English)

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20 August 2017

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Jisun L Song

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20 August 2017

Kelly H Au

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2

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20 August 2017

Kimberly T Huynh

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20 August 2017

Aaron I Packman

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4

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20 August 2017

language of work or name

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30 September 2013

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Biotechnology and Bioengineering

20 August 2017

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20 August 2017

111

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20 August 2017

3

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20 August 2017

597-607

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describes a project that uses

20 August 2017

ImageJ

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3910156/fullTextXML

inferred from PubMed Central ID database lookup

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The extracellular matrix protects Pseudomonas aeruginosa biofilms by limiting the penetration of tobramycin

20 June 2018

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A spider web strategy of type IV pili-mediated migration to build a fibre-like Psl polysaccharide matrix in Pseudomonas aeruginosa biofilms

20 June 2018

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20 June 2018

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Microfluidic approaches to bacterial biofilm formation

20 June 2018

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Mini-review: convection around biofilms

20 June 2018

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Pseudomonasbiofilm matrix composition and niche biology

20 June 2018

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A novel planar flow cell for studies of biofilm heterogeneity and flow-biofilm interactions

20 June 2018

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Rapid Prototyping of Microfluidic Systems in Poly(dimethylsiloxane).

20 June 2018

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Pattern differentiation in co-culture biofilms formed by Staphylococcus aureus and Pseudomonas aeruginosa

20 June 2018

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Shear stress increases the residence time of adhesion of Pseudomonas aeruginosa

20 June 2018

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Bacterial chemotaxis in linear and nonlinear steady microfluidic gradients

20 June 2018

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Microfluidic dissolved oxygen gradient generator biochip as a useful tool in bacterial biofilm studies

20 June 2018

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New device for high-throughput viability screening of flow biofilms

20 June 2018

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Quorum sensing and bacterial biofilms

20 June 2018

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Metabolic differentiation in biofilms as indicated by carbon dioxide production rates

20 June 2018

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Bacterial quorum-sensing network architectures

20 June 2018

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Microfluidic confinement of single cells of bacteria in small volumes initiates high-density behavior of quorum sensing and growth and reveals its variability

20 June 2018

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Flow-based microfluidic device for quantifying bacterial chemotaxis in stable, competing gradients

20 June 2018

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3D finite element model of biofilm detachment using real biofilm structures from CLSM data.

20 June 2018

1 reference

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Agr-mediated dispersal of Staphylococcus aureus biofilms

20 June 2018

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Interaction between biofilm development, structure and detachment in rotating annular reactors

20 June 2018

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Bacterial chemotaxis transverse to axial flow in a microfluidic channel

20 June 2018

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Physiological heterogeneity in biofilms

20 June 2018

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Self-organization in high-density bacterial colonies: efficient crowd control

20 June 2018

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Indole is an inter-species biofilm signal mediated by SdiA.

20 June 2018

1 reference

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Microfabrication meets microbiology

20 June 2018

1 reference

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The impact of quorum sensing and swarming motility on Pseudomonas aeruginosa biofilm formation is nutritionally conditional

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Heterogeneous Distribution of Microbial Activity in Methanogenic Aggregates: pH and Glucose Microprofiles.

20 June 2018

1 reference

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Calcium-induced virulence factors associated with the extracellular matrix of mucoid Pseudomonas aeruginosa biofilms

20 June 2018

1 reference

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Biofilm formation and dispersal and the transmission of human pathogens

20 June 2018

1 reference

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Self-generated diversity produces "insurance effects" in biofilm communities

20 June 2018

1 reference

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Oxygen limitation contributes to antibiotic tolerance of Pseudomonas aeruginosa in biofilms.

20 June 2018

1 reference

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Monitoring biofilm detachment under dynamic changes in shear stress using laser-based particle size analysis and mass fractionation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

20 June 2018

Diffusion in biofilms

1 reference

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Evaluation of the redox dye 5-cyano-2,3-tolyl-tetrazolium chloride for activity studies by simultaneous use of microautoradiography and fluorescence in situ hybridization

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Influence of hydrodynamics and cell signaling on the structure and behavior of Pseudomonas aeruginosa biofilms

20 June 2018

1 reference

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Biofilms as complex differentiated communities

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

A component of innate immunity prevents bacterial biofilm development

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Effect of flow regime on the architecture of a Pseudomonas fluorescens biofilm.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Alginate overproduction affects Pseudomonas aeruginosa biofilm structure and function

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Biofilm exopolysaccharides: a strong and sticky framework

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Quantification of biofilm structures by the novel computer program comstat

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Evaluation of fluorescently labeled lectins for noninvasive localization of extracellular polymeric substances in Sphingomonas biofilms.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Molecular tools for study of biofilm physiology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Abiotic surface sensing and biofilm-dependent regulation of gene expression in Escherichia coli.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Bacterial biofilms: a common cause of persistent infections

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Spatial physiological heterogeneity in Pseudomonas aeruginosa biofilm is determined by oxygen availability

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

The involvement of cell-to-cell signals in the development of a bacterial biofilm

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Use of a fluorescent redox probe for direct visualization of actively respiring bacteria

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Liquid flow in heterogeneous biofilms.

20 June 2018

1 reference

A two-dimensional continuum model of biofilm growth incorporating fluid flow and shear stress based detachment.

21 January 2018

1 reference

Fabrication of microbial biofilm arrays by geometric control of cell adhesion

21 January 2018

1 reference

Interaction between local hydrodynamics and algal community in epilithic biofilm

21 January 2018

1 reference

Modeling growth and quorum sensing in biofilms grown in microfluidic chambers

21 January 2018

1 reference

A microfluidic device for high throughput bacterial biofilm studies

21 January 2018

1 reference

Hydrodynamic effects on bacterial biofilm development in a microfluidic environment

21 January 2018

1 reference

Microfluidic devices for studying growth and detachment of Staphylococcus epidermidis biofilms

21 January 2018

1 reference

21 January 2018

Motion to form a quorum.

1 reference

Role of shear stress on composition, diversity and dynamics of biofilm bacterial communities.

21 January 2018

1 reference

Flow cell hydrodynamics and their effects on E. coli biofilm formation under different nutrient conditions and turbulent flow.

21 January 2018

1 reference

Modelling the effects of dispersal mechanisms and hydrodynamic regimes upon the structure of microbial communities within fluvial biofilms

21 January 2018

1 reference

Diffusion coefficient measurements in microfluidic devices

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Description of mechanical response including detachment using a novel particle model of biofilm/flow interaction.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Two-dimensional model of biofilm detachment caused by internal stress from liquid flow

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3910156

Strain-specific proteome responses of Pseudomonas aeruginosa to biofilm-associated growth and to calcium

26 November 2018

1 reference

12 December 2020

Simulation of growth and detachment in biofilm systems under defined hydrodynamic conditions

1 reference

12 December 2020

Biofilm material properties as related to shear-induced deformation and detachment phenomena

1 reference

12 December 2020

A method for growing a biofilm under low shear at the air-liquid interface using the drip flow biofilm reactor

1 reference

12 December 2020

Structural deformation of bacterial biofilms caused by short-term fluctuations in fluid shear: an in situ investigation of biofilm rheology

1 reference

12 December 2020

Identifiers

DOI

10.1002/BIT.25107

1 reference

20 August 2017

1 reference

20 August 2017

PubMed publication ID

24038055

1 reference