High-throughput analysis of the mutagenic and cytotoxic properties of DNA lesions by next-generation sequencing (Q30503321)

19 October 2017

High-throughput analysis of the mutagenic and cytotoxic properties of DNA lesions by next-generation sequencing (English)

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19 October 2017

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1

Bifeng Yuan

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19 October 2017

Jianshuang Wang

2

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19 October 2017

Huachuan Cao

series ordinal

3

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19 October 2017

Ruobai Sun

series ordinal

4

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19 October 2017

Yinsheng Wang

series ordinal

5

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19 October 2017

language of work or name

English

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publication date

5 April 2011

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19 October 2017

Nucleic Acids Research

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19 October 2017

39

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19 October 2017

14

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19 October 2017

8635-5954

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Creative Commons Attribution-NonCommercial 2.5 Generic

19 October 2017

start time

5 October 2016

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

massive parallel sequencing

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Quantification of oxidative DNA lesions in tissues of Long-Evans Cinnamon rats by capillary high-performance liquid chromatography-tandem mass spectrometry coupled with stable isotope-dilution method

inferred from title

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

6-Thioguanine and S⁶-methylthioguanine are mutagenic in human cells

20 June 2018

1 reference

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Synthesis and characterization of oligodeoxyribonucleotides containing a site-specifically incorporated N6-carboxymethyl-2'-deoxyadenosine or N4-carboxymethyl-2'-deoxycytidine

20 June 2018

1 reference

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Principles and challenges of genomewide DNA methylation analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Efficient formation of the tandem thymine glycol/8-oxo-7,8-dihydroguanine lesion in isolated DNA and the mutagenic and cytotoxic properties of the tandem lesions in Escherichia coli cells.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Sequencing technologies - the next generation

20 June 2018

1 reference

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ChIP-seq: advantages and challenges of a maturing technology

20 June 2018

1 reference

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20 June 2018

1 reference

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Chemical synthesis of oligodeoxyribonucleotides containing N3- and O4-carboxymethylthymidine and their formation in DNA

20 June 2018

1 reference

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A large genome center's improvements to the Illumina sequencing system

20 June 2018

1 reference

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Accumulation of (5'S)-8,5'-cyclo-2'-deoxyadenosine in organs of Cockayne syndrome complementation group B gene knockout mice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Mutagenic and cytotoxic properties of 6-thioguanine, S6-methylthioguanine, and guanine-S6-sulfonic acid.

20 June 2018

1 reference

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Efficient and accurate bypass of N2-(1-carboxyethyl)-2'-deoxyguanosine by DinB DNA polymerase in vitro and in vivo.

20 June 2018

1 reference

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EagleView: a genome assembly viewer for next-generation sequencing technologies

20 June 2018

1 reference

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The impact of next-generation sequencing technology on genetics

20 June 2018

1 reference

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Bulky DNA lesions induced by reactive oxygen species

20 June 2018

1 reference

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Y-family DNA polymerases in Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Mutagenesis, genotoxicity, and repair of 1-methyladenine, 3-alkylcytosines, 1-methylguanine, and 3-methylthymine in alkB Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Oxidants, oxidative stress and the biology of ageing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Removal of oxygen free-radical-induced 5',8-purine cyclodeoxynucleosides from DNA by the nucleotide excision-repair pathway in human cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Oxyradicals and DNA damage

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

N-nitroso compounds and man: sources of exposure, endogenous formation and occurrence in body fluids.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Instability and decay of the primary structure of DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Single-stranded shuttle phagemid for mutagenesis studies in mammalian cells: 8-oxoguanine in DNA induces targeted G.C-->T.A transversions in simian kidney cells

20 June 2018

1 reference

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Free-radical-induced formation of an 8,5'-cyclo-2'-deoxyguanosine moiety in deoxyribonucleic acid

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Ionizing-radiation-induced damage in the DNA of cultured human cells. Identification of 8,5-cyclo-2-deoxyguanosine

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Radiation-induced formation of purine 5',8-cyclonucleosides in isolated and cellular DNA: high stereospecificity and modulating effect of oxygen.

20 June 2018

1 reference

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DNA polymerase V allows bypass of toxic guanine oxidation products in vivo.

26 November 2018

1 reference

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Potassium diazoacetate-induced p53 mutations in vitro in relation to formation of O6-carboxymethyl- and O6-methyl-2'-deoxyguanosine DNA adducts: relevance for gastrointestinal cancer

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Assays for determining lesion bypass efficiency and mutagenicity of site-specific DNA lesions in vivo

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152323

Endogenous versus exogenous exposure to N-nitroso compounds and gastric cancer risk in the European Prospective Investigation into Cancer and Nutrition (EPIC-EURGAST) study

26 November 2018

1 reference

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The oxidative DNA lesion 8,5'-(S)-cyclo-2'-deoxyadenosine is repaired by the nucleotide excision repair pathway and blocks gene expression in mammalian cells

26 November 2018

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12 December 2020

Nitrosated glycine derivatives as a potential source of O6-methylguanine in DNA

1 reference

12 December 2020

Detection of concomitant formation of O6-carboxymethyl- and O6-methyl-2'-deoxyguanosine in DNA exposed to nitrosated glycine derivatives using a combined immunoaffinity/HPLC method

1 reference

12 December 2020

Synthesis and characterization of oligonucleotides containing 5',8-cyclopurine 2'-deoxyribonucleosides: (5'R)-5',8-cyclo-2'-deoxyadenosine, (5'S)-5',8-cyclo-2'-deoxyguanosine, and (5'R)-5',8-cyclo-2'-deoxyguanosine

1 reference

12 December 2020

8-oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKR159

1 reference

19 October 2017

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19 October 2017

PubMed publication ID

21470959

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