Eukaryote-to-eukaryote gene transfer gives rise to genome mosaicism in euglenids (Q30500462)

12 October 2017

Eukaryote-to-eukaryote gene transfer gives rise to genome mosaicism in euglenids (English)

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12 October 2017

euglenids

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5

Hisayoshi Nozaki

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12 October 2017

3

Andreas P M Weber

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12 October 2017

Shinichiro Maruyama

1

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12 October 2017

Toshinobu Suzaki

series ordinal

2

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12 October 2017

John M Archibald

series ordinal

4

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12 October 2017

18 April 2011

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12 October 2017

BMC Evolutionary Biology

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12 October 2017

11

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12 October 2017

105

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Broadly sampled multigene analyses yield a well-resolved eukaryotic tree of life

12 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Algal genes in the closest relatives of animals

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

A phylogenetic mosaic plastid proteome and unusual plastid-targeting signals in the green-colored dinoflagellate Lepidodinium chlorophorum

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Did trypanosomatid parasites contain a eukaryotic alga-derived plastid in their evolutionary past?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Phylogenomic evidence for separate acquisition of plastids in cryptophytes, haptophytes, and stramenopiles

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Translation factor LepA contributes to tellurite resistance in Escherichia coli but plays no apparent role in the fidelity of protein synthesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Sizing up the genomic footprint of endosymbiosis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Molecular phylogeny and description of the novel katablepharid Roombia truncata gen. et sp. nov., and establishment of the Hacrobia taxon nov

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Phylogenetic positions of Glaucophyta, green plants (Archaeplastida) and Haptophyta (Chromalveolata) as deduced from slowly evolving nuclear genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Cyanobacterial contribution to the genomes of the plastid-lacking protists

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Genomic footprints of a cryptic plastid endosymbiosis in diatoms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Chromalveolates and the evolution of plastids by secondary endosymbiosis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups"

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

The Chloroplast Genomes of the Green Algae Pyramimonas, Monomastix, and Pycnococcus Shed New light on the Evolutionary History of Prasinophytes and the Origin of the Secondary Chloroplasts of Euglenids

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

A rapid bootstrap algorithm for the RAxML Web servers

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Ancient recruitment by chromists of green algal genes encoding enzymes for carotenoid biosynthesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Multiple genes of apparent algal origin suggest ciliates may once have been photosynthetic.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Origins of a cyanobacterial 6-phosphogluconate dehydrogenase in plastid-lacking eukaryotes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Organelle evolution: what's in a name?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

A cryptic algal group unveiled: a plastid biosynthesis pathway in the oyster parasite Perkinsus marinus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

A photosynthetic alveolate closely related to apicomplexan parasites.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Macroevolution of complex cytoskeletal systems in euglenids

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

The origin and establishment of the plastid in algae and plants.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Origin and distribution of Calvin cycle fructose and sedoheptulose bisphosphatases in plantae and complex algae: a single secondary origin of complex red plastids and subsequent propagation via tertiary endosymbioses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

The highly conserved LepA is a ribosomal elongation factor that back-translocates the ribosome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Reconstructing the mosaic glycolytic pathway of the anaerobic eukaryote Monocercomonoides

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

The Complete Chloroplast Genome of the Chlorarachniophyte Bigelowiella natans: Evidence for Independent Origins of Chlorarachniophyte and Euglenid Secondary Endosymbionts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

The New Higher Level Classification of Eukaryotes with Emphasis on the Taxonomy of Protists

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

MUSCLE: multiple sequence alignment with high accuracy and high throughput

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Isolation and functional analysis of homogentisate phytyltransferase from Synechocystis sp. PCC 6803 and Arabidopsis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

MRBAYES: Bayesian inference of phylogenetic trees

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Are red algae plants? A critical evaluation of three key molecular data sets

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Amitochondriate amoebae and the evolution of DNA-dependent RNA polymerase II

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Convergent evolution of similar enzymatic function on different protein folds: the hexokinase, ribokinase, and galactokinase families of sugar kinases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101172

Plastid endosymbiosis, genome evolution and the origin of green plants.

20 June 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Gene sampling can bias multi-gene phylogenetic inferences: the relationship between red algae and green plants as a case study

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Monophyly of primary photosynthetic eukaryotes: green plants, red algae, and glaucophytes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

A HYPOTHESIS FOR PLASTID EVOLUTION IN CHROMALVEOLATES(1).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Plastid-derived genes in the nonphotosynthetic alveolate Oxyrrhis marina.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Plastid isoprenoid metabolism in the oyster parasite Perkinsus marinus connects dinoflagellates and malaria pathogens--new impetus for studying alveolates

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

A "green" phosphoribulokinase in complex algae with red plastids: evidence for a single secondary endosymbiosis leading to haptophytes, cryptophytes, heterokonts, and dinoflagellates

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Unique phylogenetic relationships of glucokinase and glucosephosphate isomerase of the amitochondriate eukaryotes Giardia intestinalis, Spironucleus barkhanus and Trichomonas vaginalis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Functional characterization of front-end desaturases from trypanosomatids depicts the first polyunsaturated fatty acid biosynthetic pathway from a parasitic protozoan

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Triosephosphate isomerase genes in two trophic modes of euglenoids (euglenophyceae) and their phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

QuickTree: building huge Neighbour-Joining trees of protein sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Genome history in the symbiotic hybrid Euglena gracilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

A New Divergent Type of Eukaryotic Methionine Adenosyltransferase is Present in Multiple Distantly Related Secondary Algal Lineages

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-105

Gliding movement in Peranema trichophorum is powered by flagellar surface motility

21 January 2018

1 reference

12 December 2020

Did trypanosomatid parasites have photosynthetic ancestors?

1 reference

12 December 2020

Shopping for plastids

1 reference

12 December 2020

Is there a plastid in Perkinsus atlanticus (Phylum Perkinsozoa)?

1 reference

12 December 2020

Expanded phylogenies of canonical and non-canonical types of methionine adenosyltransferase reveal a complex history of these gene families in eukaryotes

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2148-11-105

1 reference

Dimensions Publication ID

12 October 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2148-11-105

0 references

1 reference

12 October 2017

PubMed publication ID

21501489

1 reference