Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing (Q30480876)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

9 January 2020

title

Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

9 January 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

9 January 2020

Sven Rahmann

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

9 January 2020

author name string

Tobias Wittkop

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

9 January 2020

Francisco P Lobo

series ordinal

3

1 reference

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9 January 2020

publication date

17 October 2007

1 reference

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9 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

9 January 2020

volume

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

9 January 2020

page(s)

396

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

CoryneRegNet 3.0--an interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli.

9 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

Clustering by passing messages between data points

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

Fast index based algorithms and software for matching position specific scoring matrices

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

Spectral clustering of protein sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

Large scale hierarchical clustering of protein sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

SCOP database in 2004: refinements integrate structure and sequence family data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

The ASTRAL Compendium in 2004

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

The COG database: an updated version includes eukaryotes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

ProClust: improved clustering of protein sequences with an extended graph-based approach.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

An efficient algorithm for large-scale detection of protein families

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

Exact and heuristic algorithms for weighted cluster editing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

Protein complex prediction via cost-based clustering

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

GeneRAGE: a robust algorithm for sequence clustering and domain detection.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2147039

EXACT AND HEURISTIC ALGORITHMS FOR WEIGHTED CLUSTER EDITING

26 November 2018

1 reference

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1142/9781860948732_0040

Identifiers

DOI

10.1186/1471-2105-8-396

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

journals/bmcbi/WittkopBLR07

9 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17941985 AND SRC:MED&resulttype=core&format=json

9 January 2020

PubMed publication ID

17941985

1 reference