Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategy (Q30398185)

26 October 2017

Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategy (English)

1 reference

26 October 2017

dimensionality reduction

1 reference

Quan Zou

1

1 reference

26 October 2017

Shixiang Wan

2

1 reference

26 October 2017

Ying Ju

3

1 reference

26 October 2017

Jijun Tang

4

1 reference

26 October 2017

Xiangxiang Zeng

5

1 reference

26 October 2017

23 December 2016

1 reference

26 October 2017

1 reference

26 October 2017

10

1 reference

26 October 2017

Suppl 4

1 reference

26 October 2017

114

1 reference

Improving tRNAscan-SE Annotation Results via Ensemble Classifiers

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Recombination spot identification Based on gapped k-mers

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

iMiRNA-SSF: Improving the Identification of MicroRNA Precursors by Combining Negative Sets with Different Distributions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Improved and Promising Identification of Human MicroRNAs by Incorporating a High-Quality Negative Set.

20 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

20 June 2018

https://pubmed.ncbi.nlm.nih.gov/28155714

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Application of learning to rank to protein remote homology detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Improving compound-protein interaction prediction by building up highly credible negative samples

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Integrative approaches for predicting microRNA function and prioritizing disease-related microRNA using biological interaction networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

imDC: an ensemble learning method for imbalanced classification with miRNA data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Identifying DNA-binding proteins by combining support vector machine and PSSM distance transformation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

protr/ProtrWeb: R package and web server for generating various numerical representation schemes of protein sequences.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

nDNA-Prot: identification of DNA-binding proteins based on unbalanced classification.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

iDNA-Prot|dis: identifying DNA-binding proteins by incorporating amino acid distance-pairs and reduced alphabet profile into the general pseudo amino acid composition

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Effective dysphonia detection using feature dimension reduction and kernel density estimation for patients with Parkinson's disease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Identification of properties important to protein aggregation using feature selection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

An approach for identifying cytokines based on a novel ensemble classifier.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

A global characterization and identification of multifunctional enzymes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

PseAAC-Builder: a cross-platform stand-alone program for generating various special Chou's pseudo-amino acid compositions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

CD-HIT Suite: a web server for clustering and comparing biological sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

A new taxonomy-based protein fold recognition approach based on autocross-covariance transformation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

The universal protein resource (UniProt)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

PseAAC: a flexible web server for generating various kinds of protein pseudo amino acid composition

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

The molecular basis of eukaryotic transcription

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

CytoSVM: an advanced server for identification of cytokine-receptor interactions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

SVM-Prot: Web-based support vector machine software for functional classification of a protein from its primary sequence

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Protein secondary structure prediction based on position-specific scoring matrices

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5259984

Identification of microRNA precursor with the degenerate K-tuple or Kmer strategy

20 June 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

Enhanced Protein Fold Prediction Method Through a Novel Feature Extraction Technique

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

Spiking neural P systems with thresholds.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

Multi-class protein fold recognition using support vector machines and neural networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

Prediction of transporter family from protein sequence by support vector machine approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

Representation of fluctuation features in pathological knee joint vibroarthrographic signals using kernel density modeling method

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

The random subspace method for constructing decision forests

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

Adaptive Linear and Normalized Combination of Radial Basis Function Networks for Function Approximation and Regression

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/S12918-016-0353-5

An Improved Protein Structural Classes Prediction Method by Incorporating Both Sequence and Structure Information

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28155714

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12918-016-0353-5

1 reference

26 October 2017

1 reference

journals/bmcsb/ZouWJTZ16

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1050656425

0 references

Fatcat ID

release_csi7ja4e4ncf3aecn64uhb3oh4

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/csi7ja4e4ncf3aecn64uhb3oh4

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

26 October 2017

PubMed publication ID

28155714

1 reference