Protein structure. Direct observation of structure-function relationship in a nucleic acid-processing enzyme (Q30373812)

20 September 2017

Protein structure. Direct observation of structure-function relationship in a nucleic acid-processing enzyme (English)

1 reference

20 September 2017

0 references

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

Yann R. Chemla

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

5

Timothy M Lohman

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

author name string

Matthew J Comstock

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

Kevin D Whitley

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

Haifeng Jia

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

Joshua Sokoloski

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

language of work or name

English

0 references

publication date

16 April 2015

1 reference

20 September 2017

3

1 reference

based on heuristic

inferred from page(s)

published in

Science

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

volume

348

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

issue

6232

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

page(s)

352-354

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

Sequence-dependent base pair stepping dynamics in XPD helicase unwinding.

9 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Direct imaging of single UvrD helicase dynamics on long single-stranded DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Prokaryotic nucleotide excision repair.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Single-molecule imaging of the oligomer formation of the nonhexameric Escherichia coli UvrD helicase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Chemotactic adaptation kinetics of individual Escherichia coli cells.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Single-stranded DNA translocation of E. coli UvrD monomer is tightly coupled to ATP hydrolysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Rotations of the 2B Sub-domain of E. coli UvrD Helicase/Translocase Coupled to Nucleotide and DNA Binding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Ultrahigh-resolution optical trap with single-fluorophore sensitivity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

5'-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

PcrA helicase dismantles RecA filaments by reeling in DNA in uniform steps

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Single-molecule derivation of salt dependent base-pair free energies in DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Characterization of photoactivated singlet oxygen damage in single-molecule optical trap experiments.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Non-hexameric DNA helicases and translocases: mechanisms and regulation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Single-molecule studies reveal dynamics of DNA unwinding by the ring-shaped T7 helicase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Structure and mechanism of helicases and nucleic acid translocases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

A nonuniform stepping mechanism for E. coli UvrD monomer translocation along single-stranded DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Differential detection of dual traps improves the spatial resolution of optical tweezers

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

RNA translocation and unwinding mechanism of HCV NS3 helicase and its coordination by ATP

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Autoinhibition of Escherichia coli Rep monomer helicase activity by its 2B subdomain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Mechanism of ATP-dependent translocation of E.coli UvrD monomers along single-stranded DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Single-molecule assay reveals strand switching and enhanced processivity of UvrD

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Kinetic mechanism for formation of the active, dimeric UvrD helicase-DNA complex

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Single-molecule fluorescence resonance energy transfer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

An oligomeric form of E. coli UvrD is required for optimal helicase activity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Escherichia coli DNA helicase II is active as a monomer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

MutS and MutL activate DNA helicase II in a mismatch-dependent manner

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Major Domain Swiveling Revealed by the Crystal Structures of Complexes of E. coli Rep Helicase Bound to Single-Stranded DNA and ADP

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

VMD: visual molecular dynamics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Escherichia coli helicase II (urvD gene product) translocates unidirectionally in a 3' to 5' direction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

Effect of DNA polymerase I and DNA helicase II on the turnover rate of UvrABC excision nuclease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4424897

A Dimer of Escherichia coli UvrD is the active form of the helicase in vitro

20 June 2018

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.AAA0130

Repetitive shuttling of a motor protein on DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.AAA0130

Protein structure. Engineering of a superhelicase through conformational control

21 January 2018

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.AAA0130

On Estimation of a Probability Density Function and Mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.AAA0130

Predicting stability of DNA duplexes in solutions containing magnesium and monovalent cations

21 January 2018

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.AAA0130

Nonblinking and long-lasting single-molecule fluorescence imaging

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25883359

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.AAA0130

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json

9 June 2020

PubMed publication ID

25883359

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883359 AND SRC:MED&resulttype=core&format=json