Transition states for protein folding have native topologies despite high structural variability (Q30164161)

9 June 2017

title

Transition states for protein folding have native topologies despite high structural variability (English)

1 reference

9 June 2017

0 references

3

Emanuele Paci

1 reference

9 June 2017

Kresten Lindorff-Larsen

object named as

Kresten Lindorff-Larsen

series ordinal

1

0 references

Michele Vendruscolo

series ordinal

2

object named as

Michele Vendruscolo

1 reference

9 June 2017

4

Christopher M Dobson

1 reference

9 June 2017

publication date

18 April 2004

1 reference

Nature Structural & Molecular Biology

9 June 2017

published in

1 reference

9 June 2017

volume

11

1 reference

9 June 2017

issue

5

1 reference

9 June 2017

page(s)

443-449

1 reference

The fundamentals of protein folding: bringing together theory and experiment

9 June 2017

cites work

1 reference

Is there a unifying mechanism for protein folding?

21 January 2018

1 reference

Protein folding: bringing theory and experiment closer together

21 January 2018

1 reference

How do small single-domain proteins fold?

21 January 2018

1 reference

Mechanisms of protein folding

21 January 2018

1 reference

Mapping the transition state and pathway of protein folding by protein engineering

21 January 2018

1 reference

Three key residues form a critical contact network in a protein folding transition state

21 January 2018

1 reference

Determination of a transition state at atomic resolution from protein engineering data

21 January 2018

1 reference

Obligatory steps in protein folding and the conformational diversity of the transition state

21 January 2018

1 reference

Experiment and theory highlight role of native state topology in SH3 folding

21 January 2018

1 reference

The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved.

21 January 2018

1 reference

Hydrophobic core packing in the SH3 domain folding transition state

21 January 2018

1 reference

Protein folding kinetics beyond the phi value: using multiple amino acid substitutions to investigate the structure of the SH3 domain folding transition state

21 January 2018

1 reference

The identification of conserved interactions within the SH3 domain by alignment of sequences and structures

21 January 2018

1 reference

Conformational strain in the hydrophobic core and its implications for protein folding and design

21 January 2018

1 reference

Single versus parallel pathways of protein folding and fractional formation of structure in the transition state

21 January 2018

1 reference

Effective energy function for proteins in solution

21 January 2018

1 reference

Calculation of mutational free energy changes in transition states for protein folding

21 January 2018

1 reference

Molecular dynamics simulations of protein folding from the transition state

21 January 2018

1 reference

Mapping the protein universe

21 January 2018

1 reference

The ASTRAL compendium for protein structure and sequence analysis

21 January 2018

1 reference

Automated detection of remote homology

21 January 2018

1 reference

The topomer-sampling model of protein folding

21 January 2018

1 reference

The topomer search model: A simple, quantitative theory of two-state protein folding kinetics

21 January 2018

1 reference

Unspecific hydrophobic stabilization of folding transition states

21 January 2018

1 reference

Protein folding mediated by solvation: water expulsion and formation of the hydrophobic core occur after the structural collapse

21 January 2018

1 reference

Probing the folding free energy landscape of the Src-SH3 protein domain

21 January 2018

1 reference

Posttransition state desolvation of the hydrophobic core of the src-SH3 protein domain

21 January 2018

1 reference

The interpretation of protein structures: Estimation of static accessibility

21 January 2018

1 reference

Is protein folding hierarchic? II. Folding intermediates and transition states

21 January 2018

1 reference

Continuum secondary structure captures protein flexibility

21 January 2018

1 reference

Conformational analysis of peptides corresponding to beta-hairpins and a beta-sheet that represent the entire sequence of the alpha-spectrin SH3 domain.

21 January 2018

1 reference

Folding of a highly conserved diverging turn motif from the SH3 domain

21 January 2018

1 reference

Prediction and structural characterization of an independently folding substructure in the src SH3 domain.

21 January 2018

1 reference

Collective dynamics of 'small-world' networks

21 January 2018

1 reference

Small-world view of the amino acids that play a key role in protein folding.

21 January 2018

1 reference

Long-range order in the src SH3 folding transition state

21 January 2018

1 reference

beta-Hairpins, alpha-helices, and the intermediates among the secondary structures in the energy landscape of a peptide from a distal beta-hairpin of SH3 domain

21 January 2018

1 reference

Analysis of covariation in an SH3 domain sequence alignment: applications in tertiary contact prediction and the design of compensating hydrophobic core substitutions

21 January 2018

1 reference

A thermodynamic and kinetic analysis of the folding pathway of an SH3 domain entropically stabilised by a redesigned hydrophobic core

21 January 2018

1 reference

Structural and kinetic characterization of the simplified SH3 domain FP1.

21 January 2018

1 reference

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

21 January 2018

1 reference

DaliLite workbench for protein structure comparison

21 January 2018

1 reference

Reweighted atomic densities to represent ensembles of NMR structures

21 January 2018

1 reference

Evidence for a three-state model of protein folding from kinetic analysis of ubiquitin variants with altered core residues

31 March 2020

1 reference

Progressive stabilization of intermediate and transition states in protein folding reactions by introducing surface hydrophobic residues

31 March 2020

1 reference

Simulation of activation free energies in molecular systems

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NSMB765

1 reference

9 June 2017

1 reference