Metagenomes of Mediterranean Coastal Lagoons (Q29544223)

22 April 2017

1 reference

Carolina Megumi Mizuno

Carolina Megumi Mizuno

4

0 references

Rohit Ghai

Rohit Ghai

1

0 references

Antonio Camacho

Antonio Camacho

10

0 references

Katherine D. McMahon

Katherine D. McMahon

Francisco Rodriguez-Valera

9

0 references

Francisco Rodriguez-Valera

11

0 references

Ruben E. Valas

7

Ruben Valas

1 reference

22 April 2017

author name string

Claudia Mella Hernandez

2

1 reference

22 April 2017

Antonio Picazo

3

1 reference

22 April 2017

Karolina Ininbergs

5

1 reference

22 April 2017

Beatriz Díez

6

1 reference

22 April 2017

Christopher L. DuPont

8

1 reference

22 April 2017

language of work or name

English

0 references

publication date

3 July 2012

1 reference

22 April 2017

1 reference

22 April 2017

volume

2

1 reference

Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

22 April 2017

copyright license

start time

3 July 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Metagenomics of the water column in the pristine upper course of the Amazon river

22 April 2017

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De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities

22 April 2017

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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

22 April 2017

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

MEGAN analysis of metagenomic data

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance

22 April 2017

1 reference

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Genome Streamlining in a Cosmopolitan Oceanic Bacterium

22 April 2017

1 reference

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Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations

22 April 2017

1 reference

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Environmental genome shotgun sequencing of the Sargasso Sea

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Community genomics among stratified microbial assemblages in the ocean's interior

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Breaking a paradigm: cosmopolitan and abundant freshwater actinobacteria are low GC.

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

New abundant microbial groups in aquatic hypersaline environments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Metagenomic Insights into the Evolution, Function, and Complexity of the Planktonic Microbial Community of Lake Lanier, a Temperate Freshwater Ecosystem

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Yellowstone Lake: high-energy geochemistry and rich bacterial diversity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Characterization of heterotrophic prokaryote subgroups in the Sfax coastal solar salterns by combining flow cytometry cell sorting and phylogenetic analysis.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

A guide to the natural history of freshwater lake bacteria

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Novel prokaryotic diversity in sediments of Tunisian multipond solar saltern

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Environmental distribution of prokaryotic taxa

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Bacterioplankton diversity and community composition in the Southern Lagoon of Venice

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Limnohabitans australis sp. nov., isolated from a freshwater pond, and emended description of the genus Limnohabitans.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Ubiquity of Polynucleobacter necessarius ssp. asymbioticus in lentic freshwater habitats of a heterogeneous 2000 km area

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Comparative community genomics in the Dead Sea: an increasingly extreme environment

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Microbial community genomics in eastern Mediterranean Sea surface waters

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Comparative analyses of actinobacterial genomic fragments from Lake Kinneret

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Limnohabitans curvus gen. nov., sp. nov., a planktonic bacterium isolated from a freshwater lake

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Polynucleobacter cosmopolitanus sp. nov., free-living planktonic bacteria inhabiting freshwater lakes and rivers

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Bias in assessments of marine SAR11 biodiversity in environmental fosmid and BAC libraries?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget--France).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Substrate incorporation patterns of bacterioplankton populations in stratified and mixed waters of a humic lake

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Haloferula rosea gen. nov., sp. nov., Haloferula harenae sp. nov., Haloferula phyci sp. nov., Haloferula helveola sp. nov. and Haloferula sargassicola sp. nov., five marine representatives of the family Verrucomicrobiaceae within the phylum 'Verruco

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Prokaryotic diversity in one of the largest hypersaline coastal lagoons in the world

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Microbial life at high salt concentrations: phylogenetic and metabolic diversity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Metagenomic analysis of a freshwater toxic cyanobacteria bloom

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Phylogenetic ecology of the freshwater Actinobacteria acI lineage

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Global patterns in bacterial diversity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Coraliomargarita akajimensis gen. nov., sp. nov., a novel member of the phylum 'Verrucomicrobia' isolated from seawater in Japan

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Anthropogenic nutrient sources and loads from a Mediterranean catchment into a coastal lagoon: Mar Menor, Spain

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Differences in structure and dynamics of Polynucleobacter communities in a temperate and a subtropical lake, revealed at three phylogenetic levels

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Distribution of typical freshwater bacterial groups is associated with pH, temperature, and lake water retention time

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Prokaryotic sulfur oxidation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Geographic and environmental sources of variation in lake bacterial community composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Chthoniobacter flavus gen. nov., sp. nov., the first pure-culture representative of subdivision two, Spartobacteria classis nov., of the phylum Verrucomicrobia

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Isolation of strains belonging to the cosmopolitan Polynucleobacter necessarius cluster from freshwater habitats located in three climatic zones

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Temporal patterns in bacterial communities in three temperate lakes of different trophic status.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

The ocean's invisible forest.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

The cysteine residue of the SoxY protein as the active site of protein-bound sulfur oxidation of Paracoccus pantotrophus GB17.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Archaeal Biodiversity in Crystallizer Ponds from a Solar Saltern: Culture versus PCR.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Novel genes coding for lithotrophic sulfur oxidation of Paracoccus pantotrophus GB17.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Bacterial diversity in Adirondack mountain lakes as revealed by 16S rRNA gene sequences

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391805

Evidence for structuring of bacterial community composition by organic carbon source in temperate lakes

3 June 2018

1 reference

Metaxa: a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing datasets

21 January 2018

1 reference

Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers

21 January 2018

1 reference

Structural dynamics of bacterioplankton assemblages in the Lagoon of Venice

21 January 2018

1 reference

Phylogenetic relationships among the MediterraneanAlexandrium(Dinophyceae) species based on sequences of 5.8S gene and Internal Transcript Spacers of the rRNA operon

21 January 2018

1 reference

A Diatom Quality Index from a Diatom-Based Total Phosphorus Inference Model

21 January 2018

1 reference

COASTAL DIATOM-ENVIRONMENT RELATIONSHIPS FROM THE GULF OF FINLAND, BALTIC SEA1

21 January 2018

1 reference

Nutrient And Particulate Inputs Into The Mar Menor Lagoon (Se Spain) From An Intensive Agricultural Watershed

21 January 2018

1 reference

Diversity of bacteria at various depths in the southern part of lake Baikal as detected by 16S rRNA sequencing

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22778901

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The OECD member countries

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22778901

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Which factors determine the abundance and distribution of picocyanobacteria in inland waters? A comparison among different types of lakes and ponds

1 reference

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/SREP00490

2 references

22 April 2017

Dimensions Publication ID

1050036271

0 references

1 reference

1 reference

PubMed publication ID

22778901

1 reference