Involvement of the global Crp regulator in cyclic AMP-dependent utilization of aromatic amino acids by Pseudomonas putida. (Q29346840)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22081386 AND SRC:MED&resulttype=core&format=json

16 January 2020

title

Involvement of the global Crp regulator in cyclic AMP-dependent utilization of aromatic amino acids by Pseudomonas putida (English)

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16 January 2020

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ChEBI release 2020-05-28

ChEBI ID

17295

author

Juan Luis Ramos Martín

4

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16 January 2020

author name string

M Carmen Herrera

1

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16 January 2020

Abdelali Daddaoua

2

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16 January 2020

Ana Fernández-Escamilla

3

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16 January 2020

language of work or name

English

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publication date

11 November 2011

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16 January 2020

published in

Journal of Bacteriology

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16 January 2020

volume

194

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16 January 2020

issue

2

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16 January 2020

page(s)

406-412

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PhhR binds to target sequences at different distances with respect to RNA polymerase in order to activate transcription

16 January 2020

cites work

1 reference

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Catabolism of phenylalanine by Pseudomonas putida: the NtrC-family PhhR regulator binds to two sites upstream from the phhA gene and stimulates transcription with sigma70.

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Transcription activation by catabolite activator protein (CAP)

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Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees

11 April 2017

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The Crc global regulator inhibits the Pseudomonas putida pWW0 toluene/xylene assimilation pathway by repressing the translation of regulatory and structural genes.

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3 June 2018

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Global regulation of food supply by Pseudomonas putida DOT-T1E

3 June 2018

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Direct interaction between quorum-sensing regulator SmcR and RNA polymerase is mediated by integration host factor to activate vvpE encoding elastase in Vibrio vulnificus.

3 June 2018

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Identification and characterization of the PhhR regulon in Pseudomonas putida.

3 June 2018

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The Crc global regulator binds to an unpaired A-rich motif at the Pseudomonas putida alkS mRNA coding sequence and inhibits translation initiation

3 June 2018

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3 June 2018

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TtgV represses two different promoters by recognizing different sequences

3 June 2018

1 reference

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Two-state allosteric modeling suggests protein equilibrium as an integral component for cyclic AMP (cAMP) specificity in the cAMP receptor protein of Escherichia coli

3 June 2018

1 reference

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Genomic analysis reveals the major driving forces of bacterial life in the rhizosphere.

3 June 2018

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Correlation between growth rates, EIIACrr phosphorylation, and intracellular cyclic AMP levels in Escherichia coli K-12.

3 June 2018

1 reference

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Integration of signals through Crc and PtsN in catabolite repression of Pseudomonas putida TOL plasmid pWW0.

3 June 2018

1 reference

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Transcriptome analysis of Crp-dependent catabolite control of gene expression in Escherichia coli

3 June 2018

1 reference

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The Pseudomonas putida Crc global regulator controls the expression of genes from several chromosomal catabolic pathways for aromatic compounds

3 June 2018

1 reference

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Coactivation of the RpoS-dependent proP P2 promoter by fis and cyclic AMP receptor protein

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3256677

Positive activation of gene expression

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3256677

Integration host factor and cyclic AMP receptor protein are required for TyrR-mediated activation of tpl in Citrobacter freundii

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3256677

Clues and consequences of DNA bending in transcription

3 June 2018

1 reference

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DNA bending is essential for the site-specific recognition of DNA response elements by the DNA binding domain of the tumor suppressor protein p53.

3 June 2018

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Molecular and functional analysis of the TOL plasmid pWWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta cleavage pathway

3 June 2018

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3 June 2018

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Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

3 June 2018

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Bending of the bacteriophage lambda attachment site by Escherichia coli integration host factor

3 June 2018

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Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway

3 June 2018

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3 June 2018

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A new mechanism for coactivation of transcription initiation: repositioning of an activator triggered by the binding of a second activator

3 June 2018

1 reference

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Cyclic AMP in prokaryotes

3 June 2018

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Regulatory exaptation of the catabolite repression protein (Crp)-cAMP system in Pseudomonas putida.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3256677

The Pseudomonas putida Crc global regulator controls the hierarchical assimilation of amino acids in a complete medium: evidence from proteomic and genomic analyses.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3256677

Impact of lime, nitrogen and plant species on bacterial community structure in grassland microcosms

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3256677

SmcR and cyclic AMP receptor protein coactivate Vibrio vulnificus vvpE encoding elastase through the RpoS-dependent promoter in a synergistic manner.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3256677

Effect of vfr mutation on global gene expression and catabolite repression control of Pseudomonas aeruginosa

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3256677

Regulation of the Vibrio vulnificus vvpE expression by cyclic AMP-receptor protein and quorum-sensing regulator SmcR

26 November 2018

1 reference

12 December 2020

Inactivation of the Pseudomonas putida cytochrome o ubiquinol oxidase leads to a significant change in the transcriptome and to increased expression of the CIO and cbb3-1 terminal oxidases

1 reference

12 December 2020

Critical Nucleotides in the Upstream Region of the XylS-dependent TOLmeta-Cleavage Pathway Operon Promoter as Deduced from Analysis of Mutants

1 reference

12 December 2020

Promoters in the nodulation region of the Rhizobium leguminosarum Sym plasmid pRL1JI

1 reference

12 December 2020

Identifiers

DOI

10.1128/JB.06353-11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22081386 AND SRC:MED&resulttype=core&format=json

16 January 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22081386 AND SRC:MED&resulttype=core&format=json

16 January 2020

PubMed publication ID

22081386

1 reference