Ten Simple Rules for Developing Public Biological Databases (Q28595967)

5 October 2022

web application

1 reference

5 October 2022

graphical user interface

1 reference

5 October 2022

Internet

1 reference

5 October 2022

data visualization

1 reference

Alexander Crits-Christoph

5 October 2022

Mohamed Helmy

1

0 references

Gary D. Bader

object named as

Gary D Bader

series ordinal

3

0 references

series ordinal

2

object named as

Alexander Crits-Christoph

0 references

language of work or name

English

0 references

publication date

November 2016

0 references

published in

PLOS Computational Biology

0 references

volume

12

0 references

issue

11

0 references

page(s)

e1005128

0 references

copyright license

Creative Commons Attribution 4.0 International

start time

10 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Tools and data services registry: a community effort to document bioinformatics resources

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Crowdsourcing in biomedicine: challenges and opportunities

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Ten simple rules for effective online outreach

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Key challenges for the creation and maintenance of specialist protein resources

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

The 2015 Nucleic Acids Research Database Issue and molecular biology database collection

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Open source libraries and frameworks for biological data visualisation: a guide for developers

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

The InterPro protein families database: the classification resource after 15 years

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

BioJS: an open source standard for biological visualisation - its status in 2014

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

OMICtools: an informative directory for multi-omic data analysis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Bioinformatics meets user-centred design: a perspective

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

MetaBase—the wiki-database of biological databases

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

The 2011 bioinformatics links directory update: more resources, tools and databases and features to empower the bioinformatics community

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

jsPhyloSVG: a javascript library for visualizing interactive and vector-based phylogenetic trees on the web

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

GeneCards Version 3: the human gene integrator

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Human variation databases

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

URL decay in MEDLINE--a 4-year follow-up study

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Pathguide: a pathway resource list

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Ten Simple Rules for Providing a Scientific Web Resource

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

23 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

The 2016 database issue of Nucleic Acids Research and an updated molecular biology database collection

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

UniProtKB/Swiss-Prot, the Manually Annotated Section of the UniProt KnowledgeBase: How to Use the Entry View

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Cytoscape.js: a graph theory library for visualisation and analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Locus-specific databases in cancer: what future in a post-genomic era? The TP53 LSDB paradigm

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Snakemake--a scalable bioinformatics workflow engine

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

29 September 2017

D³ Data-Driven Documents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Usability testing: a review of some methodological and technical aspects of the method

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

GMODWeb: a web framework for the Generic Model Organism Database.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Open source tools and toolkits for bioinformatics: significance, and where are we?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

Editorial: Nucleic Acids Research annual Web Server Issue in 2015.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5104318

3 June 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1005128

Database resources of the National Center for Biotechnology Information

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1005128

Better bioinformatics through usability analysis

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1005128

10.1371/JOURNAL.PCBI.1005128

21 January 2018

Identifiers

DOI

0 references

DBLP publication ID

journals/ploscb/HelmyCB16

1 reference

DBLP Dataset 2021-01-02