Uncovering the protein lysine and arginine methylation network in Arabidopsis chloroplasts (Q28538053)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

title

Uncovering the protein lysine and arginine methylation network in Arabidopsis chloroplasts (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

author

Jacqueline Martin-Laffon

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Myriam Ferro

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Stéphane Ravanel

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Marianne Tardif

2

1 reference

ORCID Public Data File 2021

author name string

Claude Alban

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Morgane Mininno

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Sabine Brugière

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Annabelle Gilgen

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Sheng Ma

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Meryl Mazzoleni

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

Océane Gigarel

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

language of work or name

English

0 references

publication date

18 April 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

page(s)

e95512

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

14 March 2020

copyright license

start time

18 April 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Protein methylation at the surface and buried deep: thinking outside the histone box

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Lysine methylation of VCP by a member of a novel human protein methyltransferase family

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

PMeS: prediction of methylation sites based on enhanced feature encoding scheme

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Methylation of translation-associated proteins in Saccharomyces cerevisiae: Identification of methylated lysines and their methyltransferases.

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Reversal of histone methylation: biochemical and molecular mechanisms of histone demethylases

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Identification of arginine- and lysine-methylation in the proteome of Saccharomyces cerevisiae and its functional implications

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Protein structure prediction on the Web: a case study using the Phyre server

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Sorting signals, N-terminal modifications and abundance of the chloroplast proteome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Regulation of p53 activity through lysine methylation

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Empirical analysis of transcriptional activity in the Arabidopsis genome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Tetrahydrofolate biosynthesis in plants: molecular and functional characterization of dihydrofolate synthetase and three isoforms of folylpolyglutamate synthetase in Arabidopsis thaliana

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Protein arginine methylation in mammals: who, what, and why

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Global proteomic analysis in trypanosomes reveals unique proteins and conserved cellular processes impacted by arginine methylation

9 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

A newly uncovered group of distantly related lysine methyltransferases preferentially interact with molecular chaperones to regulate their activity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

AT_CHLORO: A Chloroplast Protein Database Dedicated to Sub-Plastidial Localization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

A method for large-scale identification of protein arginine methylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Chemical and biochemical approaches in the study of histone methylation and demethylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Prediction of lysine post-translational modifications using bioinformatic tools

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Plant PRMTs broaden the scope of arginine methylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Characterization of chloroplastic fructose 1,6-bisphosphate aldolases as lysine-methylated proteins in plants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

PLMLA: prediction of lysine methylation and lysine acetylation by combining multiple features

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

The emerging roles of protein glutathionylation in chloroplasts

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

The methylproteome and the intracellular methylation network.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Human protein arginine methyltransferase 7 (PRMT7) is a type III enzyme forming ω-NG-monomethylated arginine residues.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Evidence for Network Evolution in an Arabidopsis Interactome Map

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Plastid proteomics in higher plants: current state and future goals.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Uncovering the human methyltransferasome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Lysine methylation of nonhistone proteins is a way to regulate their stability and function.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Histone methylation in higher plants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

The chloroplast kinase network: new insights from large-scale phosphoproteome profiling.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

ATXR5 and ATXR6 are H3K27 monomethyltransferases required for chromatin structure and gene silencing.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

A toolbox for validation of mass spectrometry peptides identification and generation of database: IRMa

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Computational identification of protein methylation sites through bi-profile Bayes feature extraction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Regulation of DNMT1 stability through SET7-mediated lysine methylation in mammalian cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

PPDB, the Plant Proteomics Database at Cornell

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Protein lysine methyltransferase G9a acts on non-histone targets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

The emerging field of dynamic lysine methylation of non-histone proteins.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

MeMo: a web tool for prediction of protein methylation modifications.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

The plastid ribosomal proteins. Identification of all the proteins in the 50 S subunit of an organelle ribosome (chloroplast).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Postimport methylation of the small subunit of ribulose-1,5-bisphosphate carboxylase in chloroplasts

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Primary structure and post-translational modification of ferredoxin-NADP reductase from Chlamydomonas reinhardtii.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Post-translational modifications in the large subunit of ribulose bisphosphate carboxylase/oxygenase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

SUBA3: a database for integrating experimentation and prediction to define the SUBcellular location of proteins in Arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Proteomic analysis reveals diverse classes of arginine methylproteins in mitochondria of trypanosomes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Calmodulin methyltransferase is an evolutionarily conserved enzyme that trimethylates Lys-115 in calmodulin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Over-expression and refolding of beta-subunit from the chloroplast ATP synthase.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3991674

Complex evolutionary history and diverse domain organization of SET proteins suggest divergent regulatory interactions.

3 June 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Mass spectrometry-based identification and characterisation of lysine and arginine methylation in the human proteome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Analysis of the proteome of Saccharomyces cerevisiae for methylarginine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Proteins of diverse function and subcellular location are lysine acetylated in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Lysine acetylation is a widespread protein modification for diverse proteins in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Fifty years in the thioredoxin field and a bountiful harvest

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Protein methylation in pea chloroplasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Identification of Essential Subunits in the Plastid-Encoded RNA Polymerase Complex Reveals Building Blocks for Proper Plastid Development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Combining machine learning and homology-based approaches to accurately predict subcellular localization in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Incorporating structural characteristics for identification of protein methylation sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Calmodulin-mediated signal transduction pathways in Arabidopsis are fine-tuned by methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Two cell-cycle regulated SET-domain proteins interact with proliferating cell nuclear antigen (PCNA) in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

eEF1A Isoforms Change in Abundance and Actin-Binding Activity during Maize Endosperm Development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Exploring CP12 binding proteins revealed aldolase as a new partner for the phosphoribulokinase/glyceraldehyde 3-phosphate dehydrogenase/CP12 complex--purification and kinetic characterization of this enzyme from Chlamydomonas reinhardtii

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0095512

Light-regulated methylation of chloroplast proteins

21 January 2018

1 reference

12 December 2020

Posttranslational modifications in the amino- terminal region of the large subunit of ribulose- 1,5-bisphosphate carboxylase/oxygenase from several plant species

1 reference

12 December 2020

Purification and proteomic analysis of chloroplasts and their sub-organellar compartments

1 reference

12 December 2020

Ribosomal protein methylation in Escherichia coli: the gene prmA, encoding the ribosomal protein L11 methyltransferase, is dispensable

1 reference

12 December 2020

7 Non-histone protein lysine methyltransferases: Structure and catalytic roles

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0095512

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json

14 March 2020

PubMed publication ID

24748391

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24748391 AND SRC:MED&resulttype=core&format=json