High-resolution mapping and characterization of open chromatin across the genome (Q28266995)

Terrence S Furey

7

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Sean Davis

Sean Davis

2

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Gregory E. Crawford

8

Gregory E Crawford

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Elliott H. Margulies

5

Elliott H Margulies

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author name string

Hennady P Shulha

3

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Paul Meltzer

4

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Zhiping Weng

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

6

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language of work or name

English

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publication date

25 January 2008

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published in

Cell

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volume

132

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issue

2

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page(s)

311-22

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cites work

1 reference

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High-resolution profiling of histone methylations in the human genome

20 March 2017

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Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

20 March 2017

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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

20 March 2017

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Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)

20 March 2017

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The transcriptional landscape of the mammalian genome

20 March 2017

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Genome-wide identification of DNaseI hypersensitive sites using active chromatin sequence libraries

20 March 2017

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BLAT—The BLAST-Like Alignment Tool

20 March 2017

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Quantification of DNaseI-sensitivity by real-time PCR: quantitative analysis of DNaseI-hypersensitivity of the mouse beta-globin LCR

20 March 2017

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The protein CTCF is required for the enhancer blocking activity of vertebrate insulators

20 March 2017

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The LIM-only protein Lmo2 is a bridging molecule assembling an erythroid, DNA-binding complex which includes the TAL1, E47, GATA-1 and Ldb1/NLI proteins

20 March 2017

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TRANSFAC: a database on transcription factors and their DNA binding sites

20 March 2017

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Detection of functional DNA motifs via statistical over-representation

20 March 2017

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Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

20 March 2017

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GOstat: find statistically overrepresented Gene Ontologies within a group of genes

7 April 2017

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Comprehensive epigenetic profiling identifies multiple distal regulatory elements directing transcription of the gene encoding interferon-gamma

7 April 2017

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Statistics for ChIP-chip and DNase hypersensitivity experiments on NimbleGen arrays

29 September 2017

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DNA motifs in human and mouse proximal promoters predict tissue-specific expression

29 September 2017

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Stat5a/b are essential for normal lymphoid development and differentiation

29 September 2017

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Discovery of functional noncoding elements by digital analysis of chromatin structure

29 September 2017

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Identifying gene regulatory elements by genome-wide recovery of DNase hypersensitive sites

29 September 2017

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Controlling the double helix

29 September 2017

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Internal structure of the chromatin subunit

29 September 2017

1 reference

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The granulocyte-macrophage colony-stimulating factor/interleukin 3 locus is regulated by an inducible cyclosporin A-sensitive enhancer.

29 September 2017

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DNase I hypersensitive sites in Drosophila chromatin occur at the 5' ends of regions of transcription.

29 September 2017

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Promoter region of interleukin-2 gene undergoes chromatin structure changes and confers inducibility on chloramphenicol acetyltransferase gene during activation of T cells

29 September 2017

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Nuclease hypersensitive sites in chromatin

29 September 2017

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Protein-protein and DNA-protein interactions affect the activity of lymphoid-specific IFN regulatory factors.

29 September 2017

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Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays.

2 June 2018

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Redefinition of the cleavage sites of DNase I on the nucleosome core particle.

27 November 2018

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The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

27 November 2018

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A Distal Enhancer in the Interferon-γ (IFN-γ) Locus Revealed by Genome Sequence Comparison

27 November 2018

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12 December 2020

DNAase I, DNAase II and staphylococcal nuclease cut at different, yet symmetrically located, sites in the nucleosome core

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12 December 2020

Tissue-specific DNA cleavages in the globin chromatin domain introduced by DNAase I

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12 December 2020

A 200 base pair region at the 5' end of the chicken adult beta-globin gene is accessible to nuclease digestion

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12 December 2020

Modulation of chromatin structure regulates cytokine gene expression during T cell differentiation

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12 December 2020

10.1016/J.CELL.2007.12.014

Identifiers

DOI

1 reference

1 reference

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PubMed publication ID

18243105

1 reference