The 2'-O-methyltransferase responsible for modification of yeast tRNA at position 4 (Q27938144)

1 December 2016

title

The 2'-O-methyltransferase responsible for modification of yeast tRNA at position 4 (English)

1 reference

tRNA 2'-O-methyltransferase activity

1 December 2016

main subject

1 reference

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0106050

TRNA:m4X modification enzyme YOL125W

1 reference

GOA release 2020-03-11

author

Elizabeth J. Grayhack

object named as

Elizabeth J Grayhack

4

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author name string

Martha L Wilkinson

1

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Sharon M Crary

2

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Jane E Jackman

3

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Eric M Phizicky

5

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language of work or name

English

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publication date

March 2007

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1 reference

MODOMICS: a database of RNA modification pathways

1 December 2016

volume

13

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issue

3

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page(s)

404-13

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cites work

1 reference

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Spb1p-directed formation of Gm2922 in the ribosome catalytic center occurs at a late processing stage

20 March 2017

1 reference

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The specificities of four yeast dihydrouridine synthases for cytoplasmic tRNAs

20 March 2017

1 reference

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tRNAHis maturation: an essential yeast protein catalyzes addition of a guanine nucleotide to the 5' end of tRNAHis

20 March 2017

1 reference

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Identification of the yeast gene encoding the tRNA m1G methyltransferase responsible for modification at position 9.

20 March 2017

1 reference

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A conserved family of Saccharomyces cerevisiae synthases effects dihydrouridine modification of tRNA

20 March 2017

1 reference

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Trm7p catalyses the formation of two 2'-O-methylriboses in yeast tRNA anticodon loop

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

MRM2 encodes a novel yeast mitochondrial 21S rRNA methyltransferase

20 March 2017

1 reference

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A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP

20 March 2017

1 reference

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Synthesis and assembly of the box C D small nucleolar RNPs

20 March 2017

1 reference

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Nop58p is a common component of the box C D snoRNPs that is required for snoRNA stability

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

The yeast Saccharomyces cerevisiae YDL112w ORF encodes the putative 2'-O-ribose methyltransferase catalyzing the formation of Gm18 in tRNAs

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Nop5p is a small nucleolar ribonucleoprotein component required for pre-18 S rRNA processing in yeast

20 March 2017

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

20 March 2017

1 reference

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Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs

20 March 2017

1 reference

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Multiple sequence alignment with hierarchical clustering

20 March 2017

1 reference

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A yeast nucleolar protein related to mammalian fibrillarin is associated with small nucleolar RNA and is essential for viability

20 March 2017

1 reference

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tRNA transfers to the limelight

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

rRNA modifications and ribosome function

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Many paths to methyltransfer: a chronicle of convergence

20 March 2017

1 reference

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Compilation of tRNA sequences and sequences of tRNA genes

7 April 2017

1 reference

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The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions

7 April 2017

1 reference

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U3, U8 and U13 comprise a new class of mammalian snRNPs localized in the cell nucleolus

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Biochemical and genetic analysis of the yeast proteome with a movable ORF collection

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Depletion of Saccharomyces cerevisiae tRNA(His) guanylyltransferase Thg1p leads to uncharged tRNAHis with additional m(5)C.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

The Cm56 tRNA modification in archaea is catalyzed either by a specific 2'-O-methylase, or a C/D sRNP.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Molecular phylogenetics of the RrmJ/fibrillarin superfamily of ribose 2'-O-methyltransferases.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

RNA-guided nucleotide modification of ribosomal and other RNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Identification of molecular interactions between P-site tRNA and the ribosome essential for translocation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Classical and novel approaches to the detection and localization of the numerous modified nucleotides in eukaryotic ribosomal RNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Summary: the modified nucleosides of RNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Preferential binding of yeast tRNA ligase to pre-tRNA substrates

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

tRNA m7G methyltransferase Trm8p/Trm82p: evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Disruption and phenotypic analysis of seven ORFs from the left arm of chromosome XV of Saccharomyces cerevisiae.

2 June 2018

1 reference

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Construction of 4-thiouridine site-specifically substituted RNAs for cross-linking studies

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

The nucleotide sequence of tRNAGly from yeast

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Rapid tRNA decay can result from lack of nonessential modifications.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Two different mechanisms for tRNA ribose methylation in Archaea: a short survey

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

A facile method for high-throughput co-expression of protein pairs

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

MBP fusion protein with a viral protease cleavage site: one-step cleavage/purification of insoluble proteins

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800514

Conformational rigidity of specific pyrimidine residues in tRNA arises from posttranscriptional modifications that enhance steric interaction between the base and the 2'-hydroxyl group

27 November 2018

1 reference

12 December 2020

Posttranscriptionally modified nucleosides in transfer RNA: their locations and frequencies

1 reference

12 December 2020

Primary structure of three tRNAs from brewer's yeast: tRNAPro2, tRNAHis1 and tRNAHis2

1 reference

12 December 2020

Ribonucleoside analysis by reversed-phase high-performance liquid chromatography

1 reference

12 December 2020

Identifiers

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