Whi3, a developmental regulator of budding yeast, binds a large set of mRNAs functionally related to the endoplasmic reticulum. (Q27937564)

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

title

Whi3, a developmental regulator of budding yeast, binds a large set of mRNAs functionally related to the endoplasmic reticulum (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

MRNA-binding protein WHI3 YNL197C

11 January 2020

main subject

cell biology

0 references

endoplasmic reticulum

0 references

1 reference

GOA release 2020-03-11

author

Martí Aldea

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

Eloi Garí

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

author name string

Neus Colomina

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

Francisco Ferrezuelo

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

Hongyin Wang

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

language of work or name

English

0 references

publication date

29 July 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

11 January 2020

number of pages

10

1 reference

based on heuristic

inferred from page(s)

published in

2 references

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

volume

283

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

issue

42

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

page(s)

28670-28679

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

Cyclin Cln3 is retained at the ER and released by the J chaperone Ydj1 in late G1 to trigger cell cycle entry.

11 January 2020

cites work

1 reference

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Cis-acting determinants of asymmetric, cytoplasmic RNA transport

20 March 2017

1 reference

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Coordination of endoplasmic reticulum and mRNA localization to the yeast bud.

20 March 2017

1 reference

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Cell wall assembly in Saccharomyces cerevisiae

20 March 2017

1 reference

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Mapping pathways and phenotypes by systematic gene overexpression

20 March 2017

1 reference

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SMART 5: domains in the context of genomes and networks

20 March 2017

1 reference

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CDK activity antagonizes Whi5, an inhibitor of G1/S transcription in yeast

20 March 2017

1 reference

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Cln3 activates G1-specific transcription via phosphorylation of the SBF bound repressor Whi5.

20 March 2017

1 reference

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Recruitment of Cdc28 by Whi3 restricts nuclear accumulation of the G1 cyclin-Cdk complex to late G1.

20 March 2017

1 reference

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Widespread cytoplasmic mRNA transport in yeast: identification of 22 bud-localized transcripts using DNA microarray analysis

20 March 2017

1 reference

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FunSpec: a web-based cluster interpreter for yeast

20 March 2017

1 reference

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Sit4 is required for proper modulation of the biological functions mediated by Pkc1 and the cell integrity pathway in Saccharomyces cerevisiae

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Whi3 binds the mRNA of the G1 cyclin CLN3 to modulate cell fate in budding yeast

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Isolation and characterization of WHI3, a size-control gene of Saccharomyces cerevisiae

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Plasma membrane compartmentalization in yeast by messenger RNA transport and a septin diffusion barrier

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Activation of a membrane-bound transcription factor by regulated ubiquitin/proteasome-dependent processing.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

A generic protein purification method for protein complex characterization and proteome exploration

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Cluster analysis and display of genome-wide expression patterns

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Dissection of filamentous growth by transposon mutagenesis in Saccharomyces cerevisiae

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Human cyclins B1 and B2 are localized to strikingly different structures: B1 to microtubules, B2 primarily to the Golgi apparatus

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Improved method for high efficiency transformation of intact yeast cells

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

MIPS: analysis and annotation of genome information in 2007

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

RNA regulons: coordination of post-transcriptional events

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

From birth to death: the complex lives of eukaryotic mRNAs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Subcellular localization of the yeast proteome

7 April 2017

1 reference

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Myt1 protein kinase is essential for Golgi and ER assembly during mitotic exit

7 April 2017

1 reference

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Message on the web: mRNA and ER co-trafficking

29 September 2017

1 reference

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Response to iron deprivation in Saccharomyces cerevisiae

29 September 2017

1 reference

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SCAPER, a novel cyclin A-interacting protein that regulates cell cycle progression

29 September 2017

1 reference

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Efficient Tor signaling requires a functional class C Vps protein complex in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

mRNAs encoding polarity and exocytosis factors are cotransported with the cortical endoplasmic reticulum to the incipient bud in Saccharomyces cerevisiae.

29 September 2017

1 reference

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Control of signaling in a MAP-kinase pathway by an RNA-binding protein

29 September 2017

1 reference

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Next station in microarray data analysis: GEPAS.

29 September 2017

1 reference

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Pathways for compartmentalizing protein synthesis in eukaryotic cells: the template-partitioning model

29 September 2017

1 reference

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Moving messages: the intracellular localization of mRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Scw1p antagonizes the septation initiation network to regulate septum formation and cell separation in the fission yeast Schizosaccharomyces pombe

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

mRNA localization: message on the move

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Multifaceted physiological response allows yeast to adapt to the loss of the signal recognition particle-dependent protein-targeting pathway

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Identifying mRNA subsets in messenger ribonucleoprotein complexes by using cDNA arrays

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Large-scale identification of secreted and membrane-associated gene products using DNA microarrays

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Identification of RNAs that bind to a specific protein using the yeast three-hybrid system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

A three-hybrid system to detect RNA-protein interactions in vivo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

The Scw1 RNA-binding domain protein regulates septation and cell-wall structure in fission yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

The Cln3 cyclin is down-regulated by translational repression and degradation during the G1 arrest caused by nitrogen deprivation in budding yeast

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2661415

Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast

2 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074/JBC.M804604200

Saccharomyces Genome Database

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074/JBC.M804604200

Eukaryotic mRNPs may represent posttranscriptional operons

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/18667435

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M804604200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18667435 AND SRC:MED&resulttype=core&format=json

11 January 2020

2 references

1 December 2016