A panoramic view of yeast noncoding RNA processing (Q27937560)

PubMed

1 December 2016

title

A panoramic view of yeast noncoding RNA processing (English)

1 reference

PubMed

1 December 2016

21

Sam Roweis

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Gerard Cagney

Gerard Cagney

5

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Mark D. Robinson

Mark D Robinson

2

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Andrew Emili

23

Andrew Emili

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Quaid D Morris

Quaid Morris

6

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Nevan Krogan

4

Nevan J Krogan

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Brendan J. Frey

22

Brendan J Frey

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Jack Greenblatt

24

Jack F Greenblatt

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author name string

Wen Tao Peng

1

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Sanie Mnaimneh

3

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Armaity P Davierwala

7

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Jörg Grigull

8

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Xueqi Yang

9

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Wen Zhang

10

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Nicholas Mitsakakis

11

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Owen W Ryan

12

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Nira Datta

13

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Vladimir Jojic

14

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Chris Pal

15

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Veronica Canadien

16

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Dawn Richards

17

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Bryan Beattie

18

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Lani F Wu

19

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Steven J Altschuler

20

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Timothy R Hughes

25

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language of work or name

English

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publication date

27 June 2003

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1 reference

Functions of the exosome in rRNA, snoRNA and snRNA synthesis

1 December 2016

volume

113

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issue

7

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page(s)

919-33

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cites work

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Directed proteomic analysis of the human nucleolus

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Analyzing yeast protein-protein interaction data obtained from different sources

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Identification of a 60S preribosomal particle that is closely linked to nuclear export.

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3' end formation

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Knowledge-based analysis of microarray gene expression data by using support vector machines

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism.

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Isolation and characterization of the gene encoding yeast debranching enzyme

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Non–coding RNA genes and the modern RNA world

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Computational genomics of noncoding RNA genes

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Cluster analysis and display of genome-wide expression patterns

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https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Saccharomyces cerevisiae C1D is implicated in both non-homologous DNA end joining and homologous recombination.

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

1 reference

7 January 2021

Yeast snoRNA accumulation relies on a cleavage-dependent/polyadenylation-independent 3'-processing apparatus

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Ssf1p prevents premature processing of an early pre-60S ribosomal particle

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Purified box C/D snoRNPs are able to reproduce site-specific 2'-O-methylation of target RNA in vitro

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

A Set of Vectors with a Tetracycline-Regulatable Promoter System for Modulated Gene Expression inSaccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Functional organization of the yeast proteome by systematic analysis of protein complexes

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Bms1p, a novel GTP-binding protein, and the related Tsr1p are required for distinct steps of 40S ribosome biogenesis in yeast

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Functional profiling of the Saccharomyces cerevisiae genome

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Composition and functional characterization of yeast 66S ribosome assembly intermediates.

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

A concise guide to cDNA microarray analysis

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

The yeast RNA1 gene product necessary for RNA processing is located in the cytosol and apparently excluded from the nucleus

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https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Functional discovery via a compendium of expression profiles

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Saccharomyces Genome Database

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

A comprehensive two-hybrid analysis to explore the yeast protein interactome

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Relics from the RNA World

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

The essential protein fap7 is involved in the oxidative stress response of Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Large-scale transcriptional activity in chromosomes 21 and 22

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Yeast Rnt1p is required for cleavage of the pre-ribosomal RNA in the 3' ETS but not the 5' ETS.

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Subcellular localization of the yeast proteome

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

NSR1 is required for pre-rRNA processing and for the proper maintenance of steady-state levels of ribosomal subunits

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

MIPS: a database for genomes and protein sequences

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

The pre-ribosomal network

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

The final cut. The importance of tRNA 3'-processing.

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Quantitative assessment of the use of modified nucleoside triphosphates in expression profiling: differential effects on signal intensities and impacts on expression ratios

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Gene expression analysis using oligonucleotide arrays produced by maskless photolithography

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

The plurifunctional nucleolus

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

ERB1, the yeast homolog of mammalian Bop1, is an essential gene required for maturation of the 25S and 5.8S ribosomal RNAs

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

A generic protein purification method for protein complex characterization and proteome exploration

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

FunSpec: a web-based cluster interpreter for yeast

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Yeast Krr1p physically and functionally interacts with a novel essential Kri1p, and both proteins are required for 40S ribosome biogenesis in the nucleolus

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Nog2p, a putative GTPase associated with pre-60S subunits and required for late 60S maturation steps

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Experimental annotation of the human genome using microarray technology

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Nob1p is required for biogenesis of the 26S proteasome and degraded upon its maturation in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Three conserved members of the RNase D family have unique and overlapping functions in the processing of 5S, 5.8S, U4, U5, RNase MRP and RNase P RNAs in yeast

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Ribosome synthesis in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Box C/D small nucleolar RNA trafficking involves small nucleolar RNP proteins, nucleolar factors and a novel nuclear domain

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Guided tours: from precursor snoRNA to functional snoRNP.

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

A conserved family of Saccharomyces cerevisiae synthases effects dihydrouridine modification of tRNA

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

1 reference

https://api.crossref.org/works/10.1016/S0092-8674(03)00466-5

7 January 2021

10.1016/S0092-8674(03)00466-5

Identifiers

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1 reference

PubMed