The Reb1-homologue Ydr026c/Nsi1 is required for efficient RNA polymerase I termination in yeast (Q27936011)

1 December 2016

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8 February 2020

title

The Reb1-homologue Ydr026c/Nsi1 is required for efficient RNA polymerase I termination in yeast (English)

2 references

1 December 2016

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8 February 2020

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GOA release 2020-03-11

author

Stephan Hamperl

2

1 reference

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8 February 2020

Jorge Perez-Fernandez

5

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8 February 2020

Olivier Gadal

10

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8 February 2020

Joachim Griesenbeck

12

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8 February 2020

author name string

Alarich Reiter

1

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8 February 2020

Hannah Seitz

3

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8 February 2020

Philipp Merkl

4

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8 February 2020

Lydia Williams

6

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8 February 2020

Jochen Gerber

7

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8 February 2020

Attila Németh

8

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8 February 2020

Isabelle Léger

9

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8 February 2020

Philipp Milkereit

11

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8 February 2020

Herbert Tschochner

13

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8 February 2020

language of work or name

English

0 references

publication date

17 July 2012

1 reference

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8 February 2020

2 references

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22805593 AND SRC:MED&resulttype=core&format=json

8 February 2020

volume

31

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8 February 2020

issue

16

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8 February 2020

page(s)

3480-3493

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22805593 AND SRC:MED&resulttype=core&format=json

Nsi1 plays a significant role in the silencing of ribosomal DNA in Saccharomyces cerevisiae

8 February 2020

cites work

1 reference

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Role of the RNA/DNA kinase Grc3 in transcription termination by RNA polymerase I

20 March 2017

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Alternative chromatin structures of the 35S rRNA genes in Saccharomyces cerevisiae provide a molecular basis for the selective recruitment of RNA polymerases I and II.

20 March 2017

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Torpedo Nuclease Rat1 Is Insufficient to Terminate RNA Polymerase II in Vitro

20 March 2017

1 reference

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Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules.

20 March 2017

1 reference

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Budding yeast RNA polymerases I and II employ parallel mechanisms of transcriptional termination

20 March 2017

1 reference

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Efficient termination of transcription by RNA polymerase I requires the 5' exonuclease Rat1 in yeast

20 March 2017

1 reference

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Functional architecture of RNA polymerase I

20 March 2017

1 reference

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Inhibition of homologous recombination by a cohesin-associated clamp complex recruited to the rDNA recombination enhancer

20 March 2017

1 reference

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Roles of eukaryotic ribosomal proteins in maturation and transport of pre-18S rRNA and ribosome function

20 March 2017

1 reference

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Transcriptional regulatory code of a eukaryotic genome

20 March 2017

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Transcriptional termination by RNA polymerase I requires the small subunit Rpa12p.

20 March 2017

1 reference

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Global analysis of protein expression in yeast

20 March 2017

1 reference

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Global analysis of protein localization in budding yeast

20 March 2017

1 reference

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Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

20 March 2017

1 reference

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The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms

20 March 2017

1 reference

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Cloning and functional characterization of PTRF, a novel protein which induces dissociation of paused ternary transcription complexes

20 March 2017

1 reference

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Processing of the precursors to small nucleolar RNAs and rRNAs requires common components

20 March 2017

1 reference

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The yeast SEN1 gene is required for the processing of diverse RNA classes

20 March 2017

1 reference

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A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities

20 March 2017

1 reference

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Identification of a transcript release activity acting on ternary transcription complexes containing murine RNA polymerase I

20 March 2017

1 reference

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The release element of the yeast polymerase I transcription terminator can function independently of Reb1p

20 March 2017

1 reference

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A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA.

20 March 2017

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Loading Rho to terminate transcription

20 March 2017

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Transcription termination by nuclear RNA polymerases

20 March 2017

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Extrachromosomal rDNA circles--a cause of aging in yeast

7 April 2017

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Transcriptional silencing of Ty1 elements in the RDN1 locus of yeast

7 April 2017

1 reference

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An unusual form of transcriptional silencing in yeast ribosomal DNA

7 April 2017

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RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site

7 April 2017

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Unravelling the means to an end: RNA polymerase II transcription termination.

7 April 2017

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Bacterial transcription terminators: the RNA 3'-end chronicles

29 September 2017

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Interaction of noncoding RNA with the rDNA promoter mediates recruitment of DNMT3b and silencing of rRNA genes

29 September 2017

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The ARF tumor suppressor controls ribosome biogenesis by regulating the RNA polymerase I transcription factor TTF-I.

29 September 2017

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Electron microscope visualization of RNA transcription and processing in Saccharomyces cerevisiae by Miller chromatin spreading

29 September 2017

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The chromatin remodeling complex NoRC and TTF-I cooperate in the regulation of the mammalian rRNA genes in vivo

29 September 2017

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The two steps of poly(A)-dependent termination, pausing and release, can be uncoupled by truncation of the RNA polymerase II carboxyl-terminal repeat domain

29 September 2017

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Transcription-dependent recombination and the role of fork collision in yeast rDNA.

29 September 2017

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In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes

29 September 2017

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Complete deletion of yeast chromosomal rDNA repeats and integration of a new rDNA repeat: use of rDNA deletion strains for functional analysis of rDNA promoter elements in vivo

29 September 2017

1 reference

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Saccharomyces cerevisiae RNA polymerase I terminates transcription at the Reb1 terminator in vivo

29 September 2017

1 reference

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Synthesis of functional eukaryotic ribosomal RNAs in trans: development of a novel in vivo rDNA system for dissecting ribosome biogenesis

29 September 2017

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Molecular cloning and analysis of Schizosaccharomyces pombe Reb1p: sequence-specific recognition of two sites in the far upstream rDNA intergenic spacer

29 September 2017

1 reference

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The REB1 site is an essential component of a terminator for RNA polymerase I in Saccharomyces cerevisiae

29 September 2017

1 reference

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Mutations in eukaryotic 18S ribosomal RNA affect translational fidelity and resistance to aminoglycoside antibiotics

29 September 2017

1 reference

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Alternate pathways for processing in the internal transcribed spacer 1 in pre-rRNA of Saccharomyces cerevisiae

29 September 2017

1 reference

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Transcription termination of RNA polymerase I due to a T-rich element interacting with Reb1p

29 September 2017

1 reference

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An RNA polymerase I enhancer in Saccharomyces cerevisiae

29 September 2017

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A poly(A) addition site and a downstream termination region are required for efficient cessation of transcription by RNA polymerase II in the mouse beta maj-globin gene

29 September 2017

1 reference

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A repeated 18 bp sequence motif in the mouse rDNA spacer mediates binding of a nuclear factor and transcription termination

29 September 2017

1 reference

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Purification and characterization of TTFI, a factor that mediates termination of mouse ribosomal DNA transcription

29 September 2017

1 reference

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The mouse ribosomal gene terminator consists of three functionally separable sequence elements

29 September 2017

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Termination of transcription by yeast RNA polymerase I.

29 September 2017

1 reference

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Purification and characterization of the yeast rDNA binding protein REB1.

29 September 2017

1 reference

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REB1, a yeast DNA-binding protein with many targets, is essential for growth and bears some resemblance to the oncogene myb.

29 September 2017

1 reference

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H3 lysine 4 di- and tri-methylation deposited by cryptic transcription attenuates promoter activation

29 September 2017

1 reference

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Applied force reveals mechanistic and energetic details of transcription termination

2 June 2018

1 reference

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Epigenetic regulation of TTF-I-mediated promoter-terminator interactions of rRNA genes

2 June 2018

1 reference

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The conserved AAUAAA hexamer of the poly(A) signal can act alone to trigger a stable decrease in RNA polymerase II transcription velocity

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419925

Terminating transcription in eukaryotes: lessons learned from RNA polymerase I

2 June 2018

1 reference

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Termination of Mammalian rDNA Replication: Polar Arrest of Replication Fork Movement by Transcription Termination Factor TTF-I

2 June 2018

1 reference

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A bipartite DNA-binding domain in yeast Reb1p

2 June 2018

1 reference

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Transcription of mouse rDNA terminates downstream of the 3' end of 28S RNA and involves interaction of factors with repeated sequences in the 3' spacer

2 June 2018

1 reference

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3'-End formation of transcripts from the yeast rRNA operon

2 June 2018

1 reference

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Alpha-thalassaemia caused by a poly(A) site mutation reveals that transcriptional termination is linked to 3' end processing in the human alpha 2 globin gene

2 June 2018

1 reference

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Proteins that bind to the yeast rDNA enhancer

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419925

A yeast protein that influences the chromatin structure of UASG and functions as a powerful auxiliary gene activator

2 June 2018

1 reference

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Specific interaction of the murine transcription termination factor TTF I with class-I RNA polymerases

2 June 2018

1 reference

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Ultrastructural patterns of RNA synthesis during early embryogenesis of Drosophila melanogaster

2 June 2018

1 reference

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Co-transcriptional RNA cleavage provides a failsafe termination mechanism for yeast RNA polymerase I.

2 June 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2012.185

SIR2 regulates recombination between different rDNA repeats, but not recombination within individual rRNA genes in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2012.185

Yeast Rnt1p is required for cleavage of the pre-ribosomal RNA in the 3' ETS but not the 5' ETS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2012.185

The poly(A) signal, without the assistance of any downstream element, directs RNA polymerase II to pause in vivo and then to release stochastically from the template

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2012.185

21 January 2018

Termination by torpedo

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2012.185

A model for transcription termination by RNA polymerase I

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2012.185

RNA polymerase I transcription termination: similar mechanisms are employed by yeast and mammals

21 January 2018

1 reference

12 December 2020

RNA polymerase I from S. cerevisiae depends on an additional factor to release terminated transcripts from the template

1 reference

12 December 2020

Binding of the replication terminator protein Fob1p to the Ter sites of yeast causes polar fork arrest

1 reference

12 December 2020

ChIC and ChEC; genomic mapping of chromatin proteins

1 reference

12 December 2020

A functional mRNA polyadenylation signal is required for transcription termination by RNA polymerase II

1 reference

12 December 2020

3'-end formation of mouse pre-rRNA involves both transcription termination and a specific processing reaction

1 reference

12 December 2020

Identifiers

DOI

10.1038/EMBOJ.2012.185

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22805593 AND SRC:MED&resulttype=core&format=json

8 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22805593 AND SRC:MED&resulttype=core&format=json

8 February 2020

2 references

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22805593 AND SRC:MED&resulttype=core&format=json