Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions. (Q27935445)

PubMed publication ID

19151091

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

title

Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

1 reference

Uba4p YHR111W

1 reference

Thiosulfate sulfurtransferase YOR251C

1 reference

Ubiquitin-related modifier URM1 YIL008W

1 reference

Ncs2p YNL119W

1 reference

author

Tsutomu Suzuki

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

author name string

Akiko Noma

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

Yuriko Sakaguchi

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

language of work or name

English

0 references

publication date

16 January 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

published in

Nucleic Acids Research

2 references

PubMed publication ID

19151091

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

volume

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

issue

4

1 reference

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20 January 2020

page(s)

1335-1352

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

A functional proteomics approach links the ubiquitin-related modifier Urm1 to a tRNA modification pathway

20 January 2020

cites work

1 reference

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A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae

20 March 2017

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Thio-modification of yeast cytosolic tRNA requires a ubiquitin-related system that resembles bacterial sulfur transfer systems

20 March 2017

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A novel role for human Nfs1 in the cytoplasm: Nfs1 acts as a sulfur donor for MOCS3, a protein involved in molybdenum cofactor biosynthesis

20 March 2017

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The sulfurtransferase activity of Uba4 presents a link between ubiquitin-like protein conjugation and activation of sulfur carrier proteins

20 March 2017

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20 March 2017

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Site-directed mutagenesis of the active site loop of the rhodanese-like domain of the human molybdopterin synthase sulfurase MOCS3. Major differences in substrate specificity between eukaryotic and bacterial homologs

20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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Urmylation: A Ubiquitin-like Pathway that Functions during Invasive Growth and Budding in Yeast

20 March 2017

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Mechanistic Studies of Human Molybdopterin Synthase Reaction and Characterization of Mutants Identified in Group B Patients of Molybdenum Cofactor Deficiency

20 March 2017

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Characterization of iron-sulfur protein assembly in isolated mitochondria. A requirement for ATP, NADH, and reduced iron

20 March 2017

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20 March 2017

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20 March 2017

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Yeast mitochondrial protein, Nfs1p, coordinately regulates iron-sulfur cluster proteins, cellular iron uptake, and iron distribution

20 March 2017

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The mitochondrial proteins Atm1p and Nfs1p are essential for biogenesis of cytosolic Fe/S proteins

20 March 2017

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Apg7p/Cvt2p: A novel protein-activating enzyme essential for autophagy

20 March 2017

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Purification and characterization of a second type thioredoxin peroxidase (type II TPx) from Saccharomyces cerevisiae

20 March 2017

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A novel protein modification pathway related to the ubiquitin system

20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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Wobble modification defect in tRNA disturbs codon-anticodon interaction in a mitochondrial disease

20 March 2017

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20 March 2017

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cDNA cloning and characterization of mouse nifS-like protein, m-Nfs1: mitochondrial localization of eukaryotic NifS-like proteins

20 March 2017

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Subcellular localization of the yeast proteome

20 March 2017

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Evolution and function of ubiquitin-like protein-conjugation systems

7 April 2017

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Common thiolation mechanism in the biosynthesis of tRNA thiouridine and sulphur-containing cofactors

9 May 2017

1 reference

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The RNA acetyltransferase driven by ATP hydrolysis synthesizes N4-acetylcytidine of tRNA anticodon

29 September 2017

1 reference

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The conserved Wobble uridine tRNA thiolase Ctu1-Ctu2 is required to maintain genome integrity

29 September 2017

1 reference

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Maturation of iron-sulfur proteins in eukaryotes: mechanisms, connected processes, and diseases

29 September 2017

1 reference

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Chaplet column chromatography: isolation of a large set of individual RNAs in a single step

29 September 2017

1 reference

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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The conserved Cys-X1-X2-Cys motif present in the TtcA protein is required for the thiolation of cytidine in position 32 of tRNA from Salmonella enterica serovar Typhimurium

29 September 2017

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An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA.

29 September 2017

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29 September 2017

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Synthetic lethal analysis implicates Ste20p, a p21-activated potein kinase, in polarisome activation

29 September 2017

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Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae: implication for tRNA sorting mechanism

29 September 2017

1 reference

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The cysteine desulfurase IscS is required for synthesis of all five thiolated nucleosides present in tRNA from Salmonella enterica serovar typhimurium

29 September 2017

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Requirement for IscS in biosynthesis of all thionucleosides in Escherichia coli

29 September 2017

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The rhodanese/Cdc25 phosphatase superfamily. Sequence-structure-function relations

29 September 2017

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Enzymology of carbon-sulfur bond formation

29 September 2017

1 reference

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Characterization of Escherichia coli MoeB and its involvement in the activation of molybdopterin synthase for the biosynthesis of the molybdenum cofactor

29 September 2017

1 reference

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Thiocarboxylation of molybdopterin synthase provides evidence for the mechanism of dithiolene formation in metal-binding pterins

29 September 2017

1 reference

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A sulfurtransferase is required in the transfer of cysteine sulfur in the in vitro synthesis of molybdopterin from precursor Z in Escherichia coli

29 September 2017

1 reference

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Defect in modification at the anticodon wobble nucleotide of mitochondrial tRNA(Lys) with the MERRF encephalomyopathy pathogenic mutation.

29 September 2017

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The RNA Modification Database: 1999 update

29 September 2017

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Thiamin biosynthesis in Escherichia coli. Identification of ThiS thiocarboxylate as the immediate sulfur donor in the thiazole formation

29 September 2017

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Novel E. coli mutants deficient in biosynthesis of 5-methylaminomethyl-2-thiouridine

29 September 2017

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Molecular mechanism of codon recognition by tRNA species with modified uridine in the first position of the anticodon

29 September 2017

1 reference

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Dynamic structures and functions of transfer ribonucleic acids from extreme thermophiles

29 September 2017

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Trm9-catalyzed tRNA modifications link translation to the DNA damage response

29 September 2017

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Biosynthesis and processing of the molybdenum cofactors

2 June 2018

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Replacement of ribothymidine by 5-methyl-2-thiouridine in sequence GT psi C in tRNA of an extreme thermophile.

2 June 2018

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Interaction of tRNAs and of phosphorothioate-substituted nucleic acids with an organomercurial. Probing the chemical environment of thiolated residues by affinity electrophoresis

2 June 2018

1 reference

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Single atom modification (O-->S) of tRNA confers ribosome binding.

2 June 2018

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Orchestrating sulfur incorporation into RNA.

21 January 2018

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Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions

21 January 2018

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Snapshots of tRNA sulphuration via an adenylated intermediate.

21 January 2018

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MnmA and IscS are required for in vitro 2-thiouridine biosynthesis in Escherichia coli

21 January 2018

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Evidence that ThiI, an enzyme shared between thiamin and 4-thiouridine biosynthesis, may be a sulfurtransferase that proceeds through a persulfide intermediate

21 January 2018

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Identification of two tRNA thiolation genes required for cell growth at extremely high temperatures

21 January 2018

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Biological function of 2-thiouridine in Escherichia coli glutamic acid transfer ribonucleic acid

21 January 2018

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12 December 2020

A 2-thiouridine derivative in tRNAGlu is a positive determinant for aminoacylation by Escherichia coli glutamyl-tRNA synthetase

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12 December 2020

Reduced misreading of asparagine codons by Escherichia coli tRNALys with hypomodified derivatives of 5-methylaminomethyl-2-thiouridine in the wobble position

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12 December 2020

Urmylation controls Nil1p and Gln3p-dependent expression of nitrogen-catabolite repressed genes in Saccharomyces cerevisiae

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12 December 2020

Identifiers

DOI

10.1093/NAR/GKN1023

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151091 AND SRC:MED&resulttype=core&format=json

20 January 2020

PubMed publication ID

19151091

2 references