Protein structure prediction on the Web: a case study using the Phyre server (Q27860664)

https://api.crossref.org/works/10.1038/NPROT.2009.2

High-resolution structure prediction and the crystallographic phase problem

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

21 April 2017

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

The PSIPRED protein structure prediction server

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

CDD: a conserved domain database for interactive domain family analysis

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

The Pfam protein families database

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

21 April 2017

The 20 years of PROSITE

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

The Jpred 3 secondary structure prediction server

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Hidden Markov models for detecting remote protein homologies

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Predicting protein function from sequence and structural data.

21 April 2017

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Acquisition of triacylglycerol transfer activity by microsomal triglyceride transfer protein during evolution

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Discovery of novel alpha-glucosidase inhibitors based on the virtual screening with the homology-modeled protein structure.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Profile-profile methods provide improved fold-recognition: A study of different profile-profile alignment methods

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profiles.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

The DISOPRED server for the prediction of protein disorder

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Predicting reliable regions in protein alignments from sequence profiles.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

ConFunc--functional annotation in the twilight zone

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

An Accurate, Sensitive, and Scalable Method to Identify Functional Sites in Protein Structures

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Identification of protein biochemical functions by similarity search using the molecular surface database eF-site

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Analytical shape computation of macromolecules: I. Molecular area and volume through alpha shape

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Predicting novel protein folds by using FRAGFOLD.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Protein structure prediction and analysis using the Robetta server.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Template-based modeling and free modeling by I-TASSER in CASP7.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2009.2

Protein clefts in molecular recognition and function

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19247286

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Proceedings of the Seventh Meeting on the Critical Assessment of Techniques for Protein Structure Prediction. November 26-30, 2006. Pacific Grove, California, USA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19247286

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

SCOP: a structural classification of proteins database for the investigation of sequences and structures

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19247286