Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coli (Q27703998)

8

object named as

Ailong Ke

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author name string

Robert P Hayes

1

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Yibei Xiao

2

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Fran Ding

3

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Paul B G van Erp

4

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Kanagalaghatta Rajashankar

5

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Scott Bailey

Mechanism of CRISPR-RNA guided recognition of DNA targets in Escherichia coli

6

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language of work or name

English

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publication date

25 February 2016

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published in

Nature

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volume

530

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issue

7591

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page(s)

499-503

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cites work

1 reference

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Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coli

20 March 2017

1 reference

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Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Mechanism of Foreign DNA Selection in a Bacterial Adaptive Immune System

20 March 2017

1 reference

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PHENIX: a comprehensive Python-based system for macromolecular structure solution

20 March 2017

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Coot: model-building tools for molecular graphics

20 March 2017

1 reference

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The CCP4 suite: programs for protein crystallography

20 March 2017

1 reference

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Small CRISPR RNAs guide antiviral defense in prokaryotes

20 March 2017

1 reference

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Processing of X-ray diffraction data collected in oscillation mode

20 March 2017

1 reference

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CRISPR interference and priming varies with individual spacer sequences

7 April 2017

1 reference

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Surveillance and Processing of Foreign DNA by the Escherichia coli CRISPR-Cas System

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Crystal Structure of Staphylococcus aureus Cas9

29 September 2017

1 reference

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Targeted DNA degradation using a CRISPR device stably carried in the host genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Two distinct DNA binding modes guide dual roles of a CRISPR-Cas protein complex.

29 September 2017

1 reference

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Mechanism of foreign DNA recognition by a CRISPR RNA-guided surveillance complex from Pseudomonas aeruginosa

29 September 2017

1 reference

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Repurposing endogenous type I CRISPR-Cas systems for programmable gene repression

29 September 2017

1 reference

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Structures of CRISPR Cas3 offer mechanistic insights into Cascade-activated DNA unwinding and degradation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target

29 September 2017

1 reference

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Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli

29 September 2017

1 reference

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Unravelling the structural and mechanistic basis of CRISPR-Cas systems

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Degenerate target sites mediate rapid primed CRISPR adaptation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Type I-E CRISPR-cas systems discriminate target from non-target DNA through base pairing-independent PAM recognition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

In vitro reconstitution of an Escherichia coli RNA-guided immune system reveals unidirectional, ATP-dependent degradation of DNA target

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Structures of the RNA-guided surveillance complex from a bacterial immune system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Self versus non-self discrimination during CRISPR RNA-directed immunity.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Short motif sequences determine the targets of the prokaryotic CRISPR defence system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5134256

Directional R-Loop Formation by the CRISPR-Cas Surveillance Complex Cascade Provides Efficient Off-Target Site Rejection.

2 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038/NATURE16995

21 January 2018

Identifiers

DOI

10.1038/NATURE16995

1 reference

Dimensions Publication ID

1043239202

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1 reference

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PubMed publication ID

26863189

1 reference