Characterization and Structure of the Aquifex aeolicus Protein DUF752: A BACTERIAL tRNA-METHYLTRANSFERASE (MnmC2) FUNCTIONING WITHOUT THE USUALLY FUSED OXIDASE DOMAIN (MnmC1) (Q27674701)

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Language	Label	Description	Also known as
English	Characterization and Structure of the Aquifex aeolicus Protein DUF752: A BACTERIAL tRNA-METHYLTRANSFERASE (MnmC2) FUNCTIONING WITHOUT THE USUALLY FUSED OXIDASE DOMAIN (MnmC1)	scientific article

Statements

scholarly article

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Characterization and Structure of the Aquifex aeolicus Protein DUF752: A BACTERIAL tRNA-METHYLTRANSFERASE (MnmC2) FUNCTIONING WITHOUT THE USUALLY FUSED OXIDASE DOMAIN (MnmC1) (English)

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Aquifex aeolicus

object named as

Aquifex aeolicus

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based on heuristic

inferred from title

object named as

Toru Sengoku

3

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Shigeyuki Yokoyama

object named as

Shigeyuki Yokoyama

8

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7

object named as

Henri Grosjean

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author name string

Aya Kitamura

1

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Madoka Nishimoto

2

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Rie Shibata

4

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Gunilla Jäger

5

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Glenn R Björk

6

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Yoshitaka Bessho

9

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language of work or name

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publication date

21 December 2012

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Journal of Biological Chemistry

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287

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52

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43950-60

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Substrate tRNA Recognition Mechanism of a Multisite-specific tRNA Methyltransferase, Aquifex aeolicus Trm1, Based on the X-ray Crystal Structure

1 reference

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20 March 2017

Crystal structure of the bifunctional tRNA modification enzyme MnmC from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

20 March 2017

Structure-Function Analysis of Escherichia coli MnmG (GidA), a Highly Conserved tRNA-Modifying Enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

20 March 2017

Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

20 March 2017

Crystal structure of tRNA N2,N2-guanosine dimethyltransferase Trm1 from Pyrococcus horikoshii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

20 March 2017

Structures along the Catalytic Pathway of PrmC/HemK, an N5-Glutamine AdoMet-Dependent Methyltransferase

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20 March 2017

Features and development of Coot

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20 March 2017

The CCP4 suite: programs for protein crystallography

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20 March 2017

SOLVE and RESOLVE: automated structure solution, density modification and model building

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20 March 2017

ESPript: analysis of multiple sequence alignments in PostScript

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20 March 2017

Mitochondria-specific RNA-modifying enzymes responsible for the biosynthesis of the wobble base in mitochondrial tRNAs. Implications for the molecular pathogenesis of human mitochondrial diseases

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20 March 2017

Isolation and characterization of the TRM1 locus, a gene essential for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNA in Saccharomyces cerevisiae.

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20 March 2017

Biosynthesis of 5-methylaminomethyl-2-thiouridylate. I. Isolation of a new tRNA-methylase specific for 5-methylaminomethyl-2-thiouridylate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

20 March 2017

Further insights into the tRNA modification process controlled by proteins MnmE and GidA of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

20 March 2017

Taurine as a constituent of mitochondrial tRNAs: new insights into the functions of taurine and human mitochondrial diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

20 March 2017

tRNAdb 2009: compilation of tRNA sequences and tRNA genes

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7 April 2017

Many paths to methyltransfer: a chronicle of convergence

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7 April 2017

Enzymology of tRNA modification in the bacterial MnmEG pathway.

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29 September 2017

Human mitochondrial tRNAs: biogenesis, function, structural aspects, and diseases

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29 September 2017

Unique features of animal mitochondrial translation systems. The non-universal genetic code, unusual features of the translational apparatus and their relevance to human mitochondrial diseases

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29 September 2017

Deciphering synonymous codons in the three domains of life: co-evolution with specific tRNA modification enzymes

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29 September 2017

From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

29 September 2017

MODOMICS: a database of RNA modification pathways. 2008 update

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29 September 2017

Bringing order to translation: the contributions of transfer RNA anticodon-domain modifications

1 reference

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29 September 2017

In vitro detection of the enzymatic activity of folate-dependent tRNA (Uracil-54,-C5)-methyltransferase: evolutionary implications.

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29 September 2017

Crystallographic refinement of ligand complexes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

29 September 2017

Identification of a bifunctional enzyme MnmC involved in the biosynthesis of a hypermodified uridine in the wobble position of tRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

29 September 2017

A theoretical examination of the factors controlling the catalytic efficiency of the DNA-(adenine-N6)-methyltransferase from Thermus aquaticus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

29 September 2017

Characterisation and enzymatic properties of tRNA(guanine 26, N (2), N (2))-dimethyltransferase (Trm1p) from Pyrococcus furiosus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

29 September 2017

The role of posttranscriptional modification in stabilization of transfer RNA from hyperthermophiles

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29 September 2017

5-(carboxymethylaminomethyl)-2-thiouridine, a new modified nucleoside found at the first letter position of the anticodon

1 reference

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29 September 2017

Novel E. coli mutants deficient in biosynthesis of 5-methylaminomethyl-2-thiouridine

1 reference

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29 September 2017

A single tRNA (guanine)-methyltransferase from Tetrahymena with both mono- and di-methylating activity

1 reference

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29 September 2017

Identity elements for N2-dimethylation of guanosine-26 in yeast tRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

29 September 2017

Assay of both activities of the bifunctional tRNA-modifying enzyme MnmC reveals a kinetic basis for selective full modification of cmnm5s2U to mnm5s2U.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

2 June 2018

Sequence-structure-function analysis of the bifunctional enzyme MnmC that catalyses the last two steps in the biosynthesis of hypermodified nucleoside mnm5s2U in tRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

2 June 2018

A "gain of function" mutation in a protein mediates production of novel modified nucleosides

1 reference

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2 June 2018

Purification of a rat neurotensin receptor expressed in Escherichia coli

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2 June 2018

Replacement of ribothymidine by 5-methyl-2-thiouridine in sequence GT psi C in tRNA of an extreme thermophile.

1 reference

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2 June 2018

Transfer RNA(5-methylaminomethyl-2-thiouridine)-methyltransferase from Escherichia coli K-12 has two enzymatic activities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527978

2 June 2018

G-domain dimerization orchestrates the tRNA wobble modification reaction in the MnmE/GidA complex.

1 reference

https://api.crossref.org/works/10.1074/JBC.M112.409300

21 January 2018

Evolutionarily conserved proteins MnmE and GidA catalyze the formation of two methyluridine derivatives at tRNA wobble positions.

1 reference

https://api.crossref.org/works/10.1074/JBC.M112.409300

21 January 2018

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1074/JBC.M112.409300

21 January 2018

Identification of two tRNA thiolation genes required for cell growth at extremely high temperatures

1 reference

https://api.crossref.org/works/10.1074/JBC.M112.409300

21 January 2018

Identification of Aquifex aeolicus tRNA (m2(2G26) methyltransferase gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/23091054

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative RNomics and modomics in Mollicutes: prediction of gene function and evolutionary implications

1 reference

https://pubmed.ncbi.nlm.nih.gov/23091054

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon recognition patterns as deduced from sequences of the complete set of transfer RNA species in Mycoplasma capricolum. Resemblance to mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/23091054

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative enzymatic hydrolysis of tRNAs: reversed-phase high-performance liquid chromatography of tRNA nucleosides

1 reference

https://pubmed.ncbi.nlm.nih.gov/23091054

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribonucleoside analysis by reversed-phase high-performance liquid chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/23091054

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M112.409300

0 references

release_rmd3vi2m2jhhhphgle2hku7lmi

1 reference

https://api.fatcat.wiki/v0/release/rmd3vi2m2jhhhphgle2hku7lmi

24 November 2022

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mapped directly with Wikidata item

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