The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse Piwi proteins and piRNA biogenesis factors (Q27673500)

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13 February 2020

title

The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse Piwi proteins and piRNA biogenesis factors (English)

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13 February 2020

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6

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13 February 2020

Stephen Anthony Cusack

8

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13 February 2020

Andrés Palencia

2

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13 February 2020

Jan Kadlec

3

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13 February 2020

Adam Round

4

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13 February 2020

Konstantinos Tripsianes

5

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13 February 2020

author name string

Nikolas Mathioudakis

1

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13 February 2020

Ramesh S Pillai

7

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13 February 2020

language of work or name

English

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publication date

20 September 2012

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13 February 2020

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13 February 2020

volume

18

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13 February 2020

issue

11

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13 February 2020

page(s)

2056-2072

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Structural basis for dimethylarginine recognition by the Tudor domains of human SMN and SPF30 proteins

13 February 2020

cites work

1 reference

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piRNA-Associated Germline Nuage Formation and Spermatogenesis Require MitoPLD Profusogenic Mitochondrial-Surface Lipid Signaling

20 March 2017

1 reference

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Structural basis for recognition of arginine methylated Piwi proteins by the extended Tudor domain

20 March 2017

1 reference

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Structural basis for methylarginine-dependent recognition of Aubergine by Tudor

20 March 2017

1 reference

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Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes

20 March 2017

1 reference

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Small silencing RNAs: an expanding universe

20 March 2017

1 reference

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Tudor, MBT and chromo domains gauge the degree of lysine methylation

20 March 2017

1 reference

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Global rigid body modeling of macromolecular complexes against small-angle scattering data

20 March 2017

1 reference

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The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes

20 March 2017

1 reference

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SMN tudor domain structure and its interaction with the Sm proteins

20 March 2017

1 reference

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Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

20 March 2017

1 reference

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Likelihood-enhanced fast translation functions

20 March 2017

1 reference

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Coot: model-building tools for molecular graphics

20 March 2017

1 reference

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Refinement of macromolecular structures by the maximum-likelihood method

20 March 2017

1 reference

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MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes

20 March 2017

1 reference

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Automated protein model building combined with iterative structure refinement

20 March 2017

1 reference

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The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis

20 March 2017

1 reference

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Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila

20 March 2017

1 reference

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A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

A germline-specific class of small RNAs binds mammalian Piwi proteins

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Loss of the Mili-interacting Tudor domain-containing protein-1 activates transposons and alters the Mili-associated small RNA profile

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice

20 March 2017

1 reference

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DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

A novel class of small RNAs bind to MILI protein in mouse testes

20 March 2017

1 reference

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The mouse homolog of Drosophila Vasa is required for the development of male germ cells

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements

20 March 2017

1 reference

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MVH in piRNA processing and gene silencing of retrotransposons

20 March 2017

1 reference

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Mouse Tudor Repeat-1 (MTR-1) is a novel component of chromatoid bodies/nuages in male germ cells and forms a complex with snRNPs

20 March 2017

1 reference

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Collapse of Germline piRNAs in the Absence of Argonaute3 Reveals Somatic piRNAs in Flies

20 March 2017

1 reference

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Rapid measurement of binding constants and heats of binding using a new titration calorimeter

7 April 2017

1 reference

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PIWI-interacting small RNAs: the vanguard of genome defence

7 April 2017

1 reference

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A distinct small RNA pathway silences selfish genetic elements in the germline

7 April 2017

1 reference

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The Tudor domain 'Royal Family': Tudor, plant Agenet, Chromo, PWWP and MBT domains

7 April 2017

1 reference

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Deciphering arginine methylation: Tudor tells the tale.

7 April 2017

1 reference

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A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors

29 September 2017

1 reference

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Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila

29 September 2017

1 reference

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The piRNA pathway: a fly's perspective on the guardian of the genome.

29 September 2017

1 reference

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Elective affinities: a Tudor-Aubergine tale of germline partnership

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Building RNA-protein granules: insight from the germline

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Arginine methylation of vasa protein is conserved across phyla

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Structural insights into RNA interference

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Functional involvement of Tudor and dPRMT5 in the piRNA processing pathway in Drosophila germlines

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Arginine methylation of Piwi proteins catalysed by dPRMT5 is required for Ago3 and Aub stability

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

Mili interacts with tudor domain-containing protein 1 in regulating spermatogenesis

29 September 2017

1 reference

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The protein encoded by a murine male germ cell-specific transcript is a putative ATP-dependent RNA helicase

2 June 2018

1 reference

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Repression of retroelements in Drosophila germline via piRNA pathway by the Tudor domain protein Tejas

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

On the value of c: can low affinity systems be studied by isothermal titration calorimetry?

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3479395

DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22996915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1261/RNA.034181.112

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22996915 AND SRC:MED&resulttype=core&format=json

13 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22996915 AND SRC:MED&resulttype=core&format=json

13 February 2020

PubMed publication ID

22996915

1 reference