Structure and assembly of the essential RNA ring component of a viral DNA packaging motor (Q27667448)

19 October 2023

Fang Ding

1

Fang

Ding

1 reference

19 October 2023

Changrui Lu

2

Changrui

Lu

1 reference

19 October 2023

Wei Zhao

3

Wei

Zhao

1 reference

19 October 2023

Kanagalaghatta R Rajashankar

4

Kanagalaghatta R

Rajashankar

1 reference

19 October 2023

Dwight L Anderson

5

Dwight L

Anderson

1 reference

19 October 2023

Paul J Jardine

6

Paul J

Jardine

1 reference

19 October 2023

Shelley Grimes

7

Shelley

Grimes

1 reference

Proceedings of the National Academy of Sciences of the United States of America

19 October 2023

language of work or name

English

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publication date

3 May 2011

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published in

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volume

108

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issue

18

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page(s)

7357-62

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cites work

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1 reference

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The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces

20 March 2017

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The structure of the ATPase that powers DNA packaging into bacteriophage T4 procapsids

20 March 2017

1 reference

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Structure of the bacteriophage phi29 DNA packaging motor

20 March 2017

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The crystal structure of UUCG tetraloop

20 March 2017

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Crystal structure of a group I ribozyme domain: principles of RNA packing

20 March 2017

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20 March 2017

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Structure and function of phi29 hexameric RNA that drives the viral DNA packaging motor: review

20 March 2017

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The bacteriophage straight phi29 portal motor can package DNA against a large internal force

20 March 2017

1 reference

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Cryoelectron-microscopy image reconstruction of symmetry mismatches in bacteriophage phi29

20 March 2017

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Phylogenetic analysis and secondary structure of the Bacillus subtilis bacteriophage RNA required for DNA packaging

20 March 2017

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Situs: A package for docking crystal structures into low-resolution maps from electron microscopy

20 March 2017

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Intersubunit coordination in a homomeric ring ATPase

7 April 2017

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Novel mechanism of hexamer ring assembly in protein/RNA interactions revealed by single molecule imaging

29 September 2017

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Role of the CCA bulge of prohead RNA of bacteriophage ø29 in DNA packaging

29 September 2017

1 reference

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Comparative genomics and evolutionary trajectories of viral ATP dependent DNA-packaging systems

29 September 2017

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The bacteriophage DNA packaging motor

29 September 2017

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Analysis of intermolecular base pair formation of prohead RNA of the phage phi29 DNA packaging motor using NMR spectroscopy

29 September 2017

1 reference

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A fast-acting reagent for accurate analysis of RNA secondary and tertiary structure by SHAPE chemistry

29 September 2017

1 reference

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Counting of six pRNAs of phi29 DNA-packaging motor with customized single-molecule dual-view system

29 September 2017

1 reference

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Bacteriophage phi 29 DNA packaging

29 September 2017

1 reference

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Sequence requirement for hand-in-hand interaction in formation of RNA dimers and hexamers to gear phi29 DNA translocation motor

29 September 2017

1 reference

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Probing the structure of bacteriophage phi 29 prohead RNA with specific mutations

29 September 2017

1 reference

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Square-shaped RNA particles from different RNA folds.

29 September 2017

1 reference

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Defining molecular and domain boundaries in the bacteriophage phi29 DNA packaging motor

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3088863

DNA packaging motor assembly intermediate of bacteriophage phi29.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3088863

Alanine scanning and Fe-BABE probing of the bacteriophage ø29 prohead RNA-connector interaction

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3088863

Conservation of the capsid structure in tailed dsDNA bacteriophages: the pseudoatomic structure of phi29.

2 June 2018

1 reference

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Inter-RNA interaction of phage phi29 pRNA to form a hexameric complex for viral DNA transportation

2 June 2018

1 reference

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Interaction of gp16 with pRNA and DNA for genome packaging by the motor of bacterial virus phi29.

2 June 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1016690108

A dimer as a building block in assembling RNA. A hexamer that gears bacterial virus phi29 DNA-translocating machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1016690108

Computer modeling of three-dimensional structure of DNA-packaging RNA (pRNA) monomer, dimer, and hexamer of Phi29 DNA packaging motor

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1016690108

Topology of the components of the DNA packaging machinery in the phage phi29 prohead.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1016690108

Control of memory formation through regulated expression of a CaMKII transgene

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1016690108

A viral RNA that binds ATP and contains a motif similar to an ATP-binding aptamer from SELEX.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1016690108

Use of circular permutation to assess six bulges and four loops of DNA-packaging pRNA of bacteriophage phi29.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3088863

Modulation of the viral ATPase activity by the portal protein correlates with DNA packaging efficiency

27 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/21471452

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Function of hexameric RNA in packaging of bacteriophage phi 29 DNA in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/21471452

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1016690108

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