Structural and Functional Elucidation of the Mechanism Promoting Error-prone Synthesis by Human DNA Polymerase Opposite the 7,8-Dihydro-8-oxo-2'-deoxyguanosine Adduct (Q27656086)

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English	Structural and Functional Elucidation of the Mechanism Promoting Error-prone Synthesis by Human DNA Polymerase Opposite the 7,8-Dihydro-8-oxo-2'-deoxyguanosine Adduct	scientific article

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scholarly article

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Structural and Functional Elucidation of the Mechanism Promoting Error-prone Synthesis by Human DNA Polymerase Opposite the 7,8-Dihydro-8-oxo-2'-deoxyguanosine Adduct (English)

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4

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author name string

Adriana Irimia

1

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Robert L Eoff

2

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F Peter Guengerich

3

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language of work or name

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publication date

14 August 2009

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Journal of Biological Chemistry

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284

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33

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22467-80

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Bypass of DNA lesions generated during anticancer treatment with cisplatin by DNA polymerase eta

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20 March 2017

Hydrogen bonding of 7,8-dihydro-8-oxodeoxyguanosine with a charged residue in the little finger domain determines miscoding events in Sulfolobus solfataricus DNA polymerase Dpo4

1 reference

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20 March 2017

Stepwise translocation of Dpo4 polymerase during error-free bypass of an oxoG lesion

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20 March 2017

Role of human DNA polymerase kappa as an extender in translesion synthesis

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Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus

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20 March 2017

Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication

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20 March 2017

Crystal structure of a DinB lesion bypass DNA polymerase catalytic fragment reveals a classic polymerase catalytic domain

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20 March 2017

Structure of the catalytic core of S. cerevisiae DNA polymerase eta: implications for translesion DNA synthesis

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20 March 2017

Error-prone bypass of certain DNA lesions by the human DNA polymerase kappa

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20 March 2017

Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA

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20 March 2017

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20 March 2017

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

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20 March 2017

Main-chain bond lengths and bond angles in protein structures

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Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase eta.

1 reference

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20 March 2017

Rev1 employs a novel mechanism of DNA synthesis using a protein template

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20 March 2017

The N-clasp of human DNA polymerase kappa promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions

1 reference

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20 March 2017

Error-prone DNA polymerases: novel structures and the benefits of infidelity

1 reference

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20 March 2017

Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

20 March 2017

Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

7 April 2017

DNA polymerases: structural diversity and common mechanisms

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

7 April 2017

What a difference a decade makes: insights into translesion DNA synthesis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

29 September 2017

The noncatalytic C-terminus of AtPOLK Y-family DNA polymerase affects synthesis fidelity, mismatch extension and translesion replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

29 September 2017

Human DNA polymerase kappa encircles DNA: implications for mismatch extension and lesion bypass

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

29 September 2017

New functions for Y family polymerases

1 reference

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29 September 2017

Human DNA polymerase kappa forms nonproductive complexes with matched primer termini but not with mismatched primer termini.

1 reference

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29 September 2017

Translesion synthesis across bulky N2-alkyl guanine DNA adducts by human DNA polymerase kappa

1 reference

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29 September 2017

Magnesium-induced assembly of a complete DNA polymerase catalytic complex.

1 reference

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Interactions of carcinogen-bound DNA with individual DNA polymerases

1 reference

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Efficient and high fidelity incorporation of dCTP opposite 7,8-dihydro-8-oxodeoxyguanosine by Sulfolobus solfataricus DNA polymerase Dpo4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

29 September 2017

DNA adduct bypass polymerization by Sulfolobus solfataricus DNA polymerase Dpo4: analysis and crystal structures of multiple base pair substitution and frameshift products with the adduct 1,N2-ethenoguanine.

1 reference

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Bumps in the road: how replicative DNA polymerases see DNA damage

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Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase

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29 September 2017

Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

29 September 2017

Crystal structure of the catalytic core of human DNA polymerase kappa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

29 September 2017

Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

29 September 2017

Oxidative damage to DNA during aging: 8-hydroxy-2'-deoxyguanosine in rat organ DNA and urine

1 reference

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Ascorbic acid protects against endogenous oxidative DNA damage in human sperm

1 reference

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29 September 2017

Mechanism of efficient and accurate nucleotide incorporation opposite 7,8-dihydro-8-oxoguanine by Saccharomyces cerevisiae DNA polymerase eta.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

2 June 2018

The mutational specificity of the Dbh lesion bypass polymerase and its implications

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

2 June 2018

Immunoaffinity isolation of urinary 8-hydroxy-2'-deoxyguanosine and 8-hydroxyguanine and quantitation of 8-hydroxy-2'-deoxyguanosine in DNA by polyclonal antibodies

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

2 June 2018

Major alterations in the nucleotide structure of DNA in cancer of the female breast

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2755968

2 June 2018

Fidelity of Escherichia coli DNA polymerase IV. Preferential generation of small deletion mutations by dNTP-stabilized misalignment

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https://api.crossref.org/works/10.1074/JBC.M109.003905

21 January 2018

Investigating the role of the little finger domain of Y-family DNA polymerases in low fidelity synthesis and translesion replication.

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https://api.crossref.org/works/10.1074/JBC.M109.003905

21 January 2018

Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing

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https://api.crossref.org/works/10.1074/JBC.M109.003905

21 January 2018

Processing of X-ray diffraction data collected in oscillation mode

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https://api.crossref.org/works/10.1074/JBC.M109.003905

21 January 2018

Noncrystallographic symmetry averaging in phase refinement and extension

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https://pubmed.ncbi.nlm.nih.gov/19542228

12 December 2020

based on heuristic

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Increased formation of oxidative DNA damage, 8-hydroxydeoxyguanosine, in human livers with chronic hepatitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19542228

12 December 2020

based on heuristic

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Identifiers

10.1074/JBC.M109.003905

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release_b7yxrs2dkjeqvaps4edjedkulu

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