Proteomics: from single molecules to biological pathways (Q26851340)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

review article

2 references

25 November 2020

Proteomics: from single molecules to biological pathways (English)

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

1 reference

25 November 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

Ignat Drozdov

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

Xiaoke Yin

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

Manuel Mayr

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

author name string

Joseph Dwyer

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

language of work or name

1 reference

23 November 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

15 March 2013

1 reference

25 November 2020

Cardiovascular Research

3 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

25 November 2020

97

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

issue

4

2 references

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18 February 2020

page(s)

612-622

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

18 February 2020

copyright license

1 reference

Proteomics analysis of cardiac extracellular matrix remodeling in a porcine model of ischemia/reperfusion injury

25 November 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomics characterization of extracellular space components in the human aorta

7 April 2017

1 reference

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An atlas of combinatorial transcriptional regulation in mouse and man

7 April 2017

1 reference

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An empirical framework for binary interactome mapping

7 April 2017

1 reference

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Systematic characterization of the murine mitochondrial proteome using functionally validated cardiac mitochondria

7 April 2017

1 reference

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Towards a proteome-scale map of the human protein–protein interaction network

7 April 2017

1 reference

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A human protein-protein interaction network: a resource for annotating the proteome

7 April 2017

1 reference

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Current two-dimensional electrophoresis technology for proteomics

7 April 2017

1 reference

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Gene ontology: tool for the unification of biology

7 April 2017

1 reference

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Global quantification of mammalian gene expression control

7 April 2017

1 reference

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A practical recipe for stable isotope labeling by amino acids in cell culture (SILAC)

7 April 2017

1 reference

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Difference gel electrophoresis. A single gel method for detecting changes in protein extracts

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Identification and functionality of proteomes secreted by rat cardiac stem cells and neonatal cardiomyocytes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

The Proteomics Identifications database: 2010 update

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Reorganizing the protein space at the Universal Protein Resource (UniProt)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

KEGG for integration and interpretation of large-scale molecular data sets

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Personal omics profiling reveals dynamic molecular and medical phenotypes

7 April 2017

1 reference

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Interactome networks and human disease

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

What you see is not what you get: how sampling affects macroscopic features of biological networks

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

The first comprehensive and quantitative analysis of human platelet protein composition allows the comparative analysis of structural and functional pathways

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Prospective study on circulating MicroRNAs and risk of myocardial infarction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

A hybrid approach to protein differential expression in mass spectrometry-based proteomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Computational and statistical analysis of protein mass spectrometry data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

The impact of focused Gene Ontology curation of specific mammalian systems

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Computational mass spectrometry-based proteomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Reconstruction and analysis of human heart-specific metabolic network based on transcriptome and proteome data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Mitochondrial proteome remodelling in pressure overload-induced heart failure: the role of mitochondrial oxidative stress

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Fourier Transform Mass Spectrometry

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Principles of Electrospray Ionization

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Extracellular matrix composition and remodeling in human abdominal aortic aneurysms: a proteomics approach

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

The representation of heart development in the gene ontology

28 September 2017

1 reference

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Proteomics: a reality-check for putative stem cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Statistical issues in quality control of proteomic analyses: Good experimental design and planning

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomic characterization of human early pro-angiogenic cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Gene coexpression network topology of cardiac development, hypertrophy, and failure

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Genome-wide expression patterns in physiological cardiac hypertrophy

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Protein networks reveal detection bias and species consistency when analysed by information-theoretic methods

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Plasma microRNA profiling reveals loss of endothelial miR-126 and other microRNAs in type 2 diabetes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteome-wide protein concentrations in the human heart.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Network systems biology for drug discovery

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

A human functional protein interaction network and its application to cancer data analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomics analysis of the cardiac myofilament subproteome reveals dynamic alterations in phosphatase subunit distribution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomics, metabolomics, and immunomics on microparticles derived from human atherosclerotic plaques

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Metabolomics: ready for the prime time?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Global signatures of protein and mRNA expression levels

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Network properties of complex human disease genes identified through genome-wide association studies

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomic and metabolomic analysis of cardioprotection: Interplay between protein kinase C epsilon and delta in regulating glucose metabolism of murine hearts

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Significance analysis of spectral count data in label-free shotgun proteomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Difference gel electrophoresis based on lys/cys tagging

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Transgenic system for conditional induction and rescue of chronic myocardial hibernation provides insights into genomic programs of hibernation.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Design and analysis issues in quantitative proteomics studies

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomics study of membrane proteins from primary human [...]

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomics and metabolomics combined in cardiovascular research

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomics-based development of biomarkers in cardiovascular disease: mechanistic, clinical, and therapeutic insights

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomics of the heart: unraveling disease

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Pathway analysis of coronary atherosclerosis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Subnets of scale-free networks are not scale-free: sampling properties of networks

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

The proteome and secretome of human arterial smooth muscle cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Vascular proteomics: linking proteomic and metabolomic changes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomics of heart disease

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Cardiovascular proteomics: evolution and potential

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Metabolic homeostasis is maintained in myocardial hibernation by adaptive changes in the transcriptome and proteome

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Addressing accuracy and precision issues in iTRAQ quantitation

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583257

Proteomic and metabolomic analyses of atherosclerotic vessels from apolipoprotein E-deficient mice reveal alterations in inflammation, oxidative stress, and energy metabolism

31 May 2018

1 reference

A fluorescent codetection system for immunoblotting and proteomics through ECL-Plex and CyDye labeling

21 January 2018

1 reference

SILAC mouse for quantitative proteomics uncovers kindlin-3 as an essential factor for red blood cell function

21 January 2018

1 reference

Relative protein quantification by MS/MS using the tandem mass tag technology

21 January 2018

1 reference

Proteomic and metabolomic analysis of vascular smooth muscle cells: role of PKCdelta

21 January 2018

1 reference

Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards

21 January 2018

1 reference

Spectral index for assessment of differential protein expression in shotgun proteomics

21 January 2018

1 reference

Ischemic preconditioning exaggerates cardiac damage in PKC-delta null mice

21 January 2018

1 reference

Loss of PKC-delta alters cardiac metabolism

21 January 2018

1 reference

Combined metabolomic and proteomic analysis of human atrial fibrillation

21 January 2018

1 reference

Functional and quantitative proteomics using SILAC

21 January 2018

1 reference

Statistical Analysis of Membrane Proteome Expression Changes inSaccharomycescerevisiae

21 January 2018

1 reference

Characterization of the Human Myocardial Proteome in Inflammatory Dilated Cardiomyopathy by Label-free Quantitative Shotgun Proteomics of Heart Biopsies

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/23180722

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Selective detection of membrane proteins without antibodies: a mass spectrometric version of the Western blot

1 reference

https://pubmed.ncbi.nlm.nih.gov/23180722

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/CVR/CVS346

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json

18 February 2020

PubMed publication ID

23180722

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23180722 AND SRC:MED&resulttype=core&format=json