Predicting binding sites of hydrolase-inhibitor complexes by combining several methods (Q24803271)

Taner Z Sen

1

0 references

Drena Dobbs

Drena Dobbs

11

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Kai-Ming Ho

6

Kai-Ming Ho

0 references

Cai-Zhuang Wang

7

Cai-Zhuang Wang

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Robert L Jernigan

3

Robert L Jernigan

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Andrzej Kloczkowski

2

Andrzej Kloczkowski

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author name string

Changhui Yan

4

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Yungok Ihm

8

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Haibo Cao

9

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Xun Gu

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

10

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language of work or name

English

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publication date

2004

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published in

BMC Bioinformatics

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volume

5

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issue

1

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page(s)

205

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cites work

1 reference

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A new structural class of serine protease inhibitors revealed by the structure of the hirustasin-kallikrein complex

7 April 2017

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Crystal structure of an elastase-specific inhibitor elafin complexed with porcine pancreatic elastase determined at 1.9 A resolution

7 April 2017

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Refined crystal structure of the potato inhibitor complex of carboxypeptidase A at 2.5 A resolution

7 April 2017

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Structure of the complex of Streptomyces griseus protease B and the third domain of the turkey ovomucoid inhibitor at 1.8-A resolution

7 April 2017

1 reference

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Refined crystal structure of the complex of subtilisin BPN' and Streptomyces subtilisin inhibitor at 1.8 A resolution

7 April 2017

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Protein structure comparison by alignment of distance matrices

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28 September 2017

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28 September 2017

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Prediction of protein-protein interactions from evolutionary information.

28 September 2017

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Development of unified statistical potentials describing protein-protein interactions.

28 September 2017

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MULTIPROSPECTOR: an algorithm for the prediction of protein-protein interactions by multimeric threading

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28 September 2017

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Predicting protein--protein interactions from primary structure

28 September 2017

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Universally conserved positions in protein folds: reading evolutionary signals about stability, folding kinetics and function

28 September 2017

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28 September 2017

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Analysis of protein-protein interaction sites using surface patches

28 September 2017

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28 September 2017

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A method to predict functional residues in proteins

28 September 2017

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Sequence-structure matching in globular proteins: application to supersecondary and tertiary structure determination

28 September 2017

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Principles of protein-protein recognition

28 September 2017

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Different protein sequences can give rise to highly similar folds through different stabilizing interactions.

28 September 2017

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Predicting protein-protein interactions using signature products

30 May 2018

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28 November 2018

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Prediction of protein-protein interactions based on surface patch comparison

28 November 2018

1 reference

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28 November 2018

1 reference

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28 November 2018

1 reference

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Predicted protein-protein interaction sites from local sequence information.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544855

Prediction of protein--protein interaction sites in heterocomplexes with neural networks.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544855

Prediction of protein interaction sites from sequence profile and residue neighbor list

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544855

A fast method to predict protein interaction sites from sequences

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544855

Identifying sequence-structure pairs undetected by sequence alignments.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544855

Prediction of protein-protein interaction sites using patch analysis

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544855

Prediction of potential protein-protein interaction sites from amino acid sequence. Identification of a fibrin polymerization site.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544855

Statistical methods for testing functional divergence after gene duplication

28 November 2018

1 reference

12 December 2020

Dissecting protein-protein recognition sites

1 reference

12 December 2020

Linear programming optimization and a double statistical filter for protein threading protocols

1 reference

12 December 2020

Identifying a folding nucleus for the lysozyme/alpha-lactalbumin family from sequence conservation clusters

1 reference

12 December 2020

Non-functional conserved residues in globins and their possible role as a folding nucleus

1 reference

12 December 2020

Crystal and molecular structure of the bovine α-chymotrypsin-eglin c complex at 2.0 Å resolution

1 reference

12 December 2020

journals/bmcbi/SenKJYHHWICGD04

Identifiers

DOI

10.1186/1471-2105-5-205

0 references

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02