Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d (Q24794393)

2

object named as

Tzu-Ping Ko

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author name string

Chin-Yu Chen

1

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Ting-Wan Lin

3

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Chia-Cheng Chou

4

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Andrew H-J Wang

Crystal structure of a POU/HMG/DNA ternary complex suggests differential assembly of Oct4 and Sox2 on two enhancers

6

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language of work or name

English

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publication date

2005

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published in

Nucleic Acids Research

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volume

33

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issue

1

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page(s)

430-8

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cites work

1 reference

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Flexible DNA bending in HU-DNA cocrystal structures

7 April 2017

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The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding

7 April 2017

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Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs

7 April 2017

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The structure of a chromosomal high mobility group protein-DNA complex reveals sequence-neutral mechanisms important for non-sequence-specific DNA recognition

7 April 2017

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Basis for recognition of cisplatin-modified DNA by high-mobility-group proteins

7 April 2017

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Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding

7 April 2017

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The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA

7 April 2017

1 reference

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The hyperthermophile chromosomal protein Sac7d sharply kinks DNA

7 April 2017

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Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn

7 April 2017

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Crystal structure of a human TATA box-binding protein/TATA element complex

7 April 2017

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Crystal structure of the lactose operon repressor and its complexes with DNA and inducer

7 April 2017

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Co-crystal structure of TBP recognizing the minor groove of a TATA element

7 April 2017

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Crystal structure of a yeast TBP/TATA-box complex

7 April 2017

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Crystal structure of LacI member, PurR, bound to DNA: minor groove binding by alpha helices

7 April 2017

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Molecular basis of human 46X,Y sex reversal revealed from the three-dimensional solution structure of the human SRY-DNA complex

7 April 2017

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Structural basis for DNA bending by the architectural transcription factor LEF-1

7 April 2017

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The CCP4 suite: programs for protein crystallography

7 April 2017

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Raster3D Version 2.0. A program for photorealistic molecular graphics

7 April 2017

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3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures

7 April 2017

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Automated MAD and MIR structure solution

7 April 2017

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

7 April 2017

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Improved methods for building protein models in electron density maps and the location of errors in these models

7 April 2017

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Partial B-to-A DNA transition upon minor groove binding of protein Sac7d monitored by Raman spectroscopy

7 April 2017

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Protein-DNA hydrophobic recognition in the minor groove is facilitated by sugar switching

28 September 2017

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The role of intercalating residues in chromosomal high-mobility-group protein DNA binding, bending and specificity

28 September 2017

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28 September 2017

Map-likelihood phasing

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The solution structure of the Sac7d/DNA complex: a small-angle X-ray scattering study

28 September 2017

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DNA bending: the prevalence of kinkiness and the virtues of normality

28 September 2017

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NUCPLOT: a program to generate schematic diagrams of protein-nucleic acid interactions

28 September 2017

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Intercalation, DNA kinking, and the control of transcription.

28 September 2017

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DNA bending creates favored sites for retroviral integration: an explanation for preferred insertion sites in nucleosomes.

28 September 2017

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Sequence-directed curvature of DNA.

28 September 2017

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Architectural transcription factors: proteins that remodel DNA.

28 September 2017

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DNA bending and the curious case of Fos/Jun

28 September 2017

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Gene cloning, expression, and characterization of the Sac7 proteins from the hyperthermophile Sulfolobus acidocaldarius.

30 May 2018

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Sequence-induced DNA curvature at the bacteriophage lambda origin of replication

30 May 2018

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Thermodynamic characterization of non-sequence-specific DNA-binding by the Sso7d protein from Sulfolobus solfataricus

30 May 2018

1 reference

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Equilibrium DNA binding of Sac7d protein from the hyperthermophile Sulfolobus acidocaldarius: fluorescence and circular dichroism studies.

28 November 2018

1 reference

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Structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers

28 November 2018

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12 December 2020

Processing of X-ray diffraction data collected in oscillation mode

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12 December 2020

Hyperthermophile protein folding thermodynamics: differential scanning calorimetry and chemical denaturation of Sac7d

1 reference

12 December 2020

Transcriptional activation of the catechol and chlorocatechol operons: variations on a theme

1 reference

12 December 2020