Different modes of stop codon restriction by the Stylonychia and Paramecium eRF1 translation termination factors (Q24682497)

19 October 2023

Petr Kolosov

2

Petr

Kolosov

1 reference

19 October 2023

Laure Bidou

3

Laure

Bidou

1 reference

19 October 2023

Ludmila Frolova

4

Ludmila

Frolova

1 reference

19 October 2023

Jean-Pierre Rousset

5

Jean-Pierre

Rousset

1 reference

19 October 2023

Lev Kisselev

6

Lev

Kisselev

1 reference

Proceedings of the National Academy of Sciences of the United States of America

19 October 2023

language of work or name

English

0 references

publication date

26 June 2007

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published in

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volume

104

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issue

26

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page(s)

10824-9

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cites work

Invariant amino acids essential for decoding function of polypeptide release factor eRF1.

1 reference

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Termination of translation: interplay of mRNA, rRNAs and release factors?

7 April 2017

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The invariant uridine of stop codons contacts the conserved NIKSR loop of human eRF1 in the ribosome

7 April 2017

1 reference

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A highly conserved eukaryotic protein family possessing properties of polypeptide chain release factor

7 April 2017

1 reference

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Structure of the Escherichia coli ribosomal termination complex with release factor 2

7 April 2017

1 reference

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A cryo-electron microscopic study of ribosome-bound termination factor RF2

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Bacterial polypeptide release factor RF2 is structurally distinct from eukaryotic eRF1

7 April 2017

1 reference

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The crystal structure of human eukaryotic release factor eRF1--mechanism of stop codon recognition and peptidyl-tRNA hydrolysis

7 April 2017

1 reference

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Stop codons and UGG promote efficient binding of the polypeptide release factor eRF1 to the ribosomal A site

7 April 2017

1 reference

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Stop codon recognition in ciliates: Euplotes release factor does not respond to reassigned UGA codon

7 April 2017

1 reference

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Terminating eukaryote translation: domain 1 of release factor eRF1 functions in stop codon recognition

7 April 2017

1 reference

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The "megaprimer" method of site-directed mutagenesis

7 April 2017

1 reference

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Distinct paths to stop codon reassignment by the variant-code organisms Tetrahymena and Euplotes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Decoding the decoding region: analysis of eukaryotic release factor (eRF1) stop codon-binding residues

28 September 2017

1 reference

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Molecular mimicry in the decoding of translational stop signals.

28 September 2017

1 reference

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Stop codon selection in eukaryotic translation termination: comparison of the discriminating potential between human and ciliate eRF1s

28 September 2017

1 reference

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Making sense of mimic in translation termination

28 September 2017

1 reference

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Release of peptide promoted by the GGQ motif of class 1 release factors regulates the GTPase activity of RF3.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Omnipotent decoding potential resides in eukaryotic translation termination factor eRF1 of variant-code organisms and is modulated by the interactions of amino acid sequences within domain 1.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Highly conserved NIKS tetrapeptide is functionally essential in eukaryotic translation termination factor eRF1.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Convergence and constraint in eukaryotic release factor 1 (eRF1) domain 1: the evolution of stop codon specificity.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Class-1 translation termination factors: invariant GGQ minidomain is essential for release activity and ribosome binding but not for stop codon recognition

28 September 2017

1 reference

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The molecular basis of nuclear genetic code change in ciliates.

28 September 2017

1 reference

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Class I release factors in ciliates with variant genetic codes

28 September 2017

1 reference

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Translational termination comes of age.

28 September 2017

1 reference

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Nonsense-mediated decay mutants do not affect programmed -1 frameshifting

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Translational frameshifting at the gag-pol junction of human immunodeficiency virus type 1 is not increased in infected T-lymphoid cells.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Versatile vectors to study recoding: conservation of rules between yeast and mammalian cells.

28 September 2017

1 reference

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Firefly luciferase luminescence assays using scintillation counters for quantitation in transfected mammalian cells

28 September 2017

1 reference

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Release factors eRF1 and RF2: a universal mechanism controls the large conformational changes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Premature stop codons involved in muscular dystrophies show a broad spectrum of readthrough efficiencies in response to gentamicin treatment.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Conversion of omnipotent translation termination factor eRF1 into ciliate-like UGA-only unipotent eRF1.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Mammalian release factor; in vitro assay and purification.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904165

Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis.

30 May 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0703887104

Newly sequenced eRF1s from ciliates: the diversity of stop codon usage and the molecular surfaces that are important for stop codon interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0703887104

In vitro reconstitution of eukaryotic translation reveals cooperativity between release factors eRF1 and eRF3

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0703887104

Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0703887104

Overexpression and purification of recombinant eRF1 proteins of rabbit and Tetrahymena thermophila

21 January 2018

1 reference

12 December 2020

[Molecular modeling of structure of eukaryotic ribosomal translation termination complex]

1 reference

12 December 2020

Evolution of eukaryotic translation elongation and termination factors: variations of evolutionary rate and genetic code deviations

1 reference

12 December 2020

The essential role of the invariant GGQ motif in the function and stability in vivo of bacterial release factors RF1 and RF2

1 reference

12 December 2020

Structural analyses of peptide release factor 1 from Thermotoga maritima reveal domain flexibility required for its interaction with the ribosome

1 reference

12 December 2020

[Influence of individual domains of the translation termination factor eRF1 on induction of the GTPase activity of the translation termination factor eRF3]

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0703887104

1 reference

ADS bibcode

2007PNAS..10410824L

0 references

1 reference

1 reference

1 reference