Mosaic retroposon insertion patterns in placental mammals (Q24651904)

6

object named as

Jürgen Schmitz

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Jürgen Brosius

5

object named as

Jürgen Brosius

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author name string

Gennady Churakov

1

0 references

Jan Ole Kriegs

2

0 references

Anja Zemann

Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced their earliest radiations

4

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language of work or name

English

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publication date

May 2009

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published in

Genome Research

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volume

19

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issue

5

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page(s)

868-75

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cites work

1 reference

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Genome analysis of the platypus reveals unique signatures of evolution

7 April 2017

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Confirming the phylogeny of mammals by use of large comparative sequence data sets

7 April 2017

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

7 April 2017

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Multiple molecular evidences for a living mammalian fossil

7 April 2017

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Using genomic data to unravel the root of the placental mammal phylogeny

7 April 2017

1 reference

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Early history of mammals is elucidated with the ENCODE multiple species sequencing data

7 April 2017

1 reference

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Pegasoferae, an unexpected mammalian clade revealed by tracking ancient retroposon insertions

7 April 2017

1 reference

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Retroposed elements as archives for the evolutionary history of placental mammals

7 April 2017

1 reference

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Genomic deletions and precise removal of transposable elements mediated by short identical DNA segments in primates

7 April 2017

1 reference

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Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes

7 April 2017

1 reference

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Human-mouse alignments with BLASTZ

7 April 2017

1 reference

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Mapping Human Genetic Ancestry

7 April 2017

1 reference

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Retroposed elements and their flanking regions resolve the evolutionary history of xenarthran mammals (armadillos, anteaters, and sloths)

7 April 2017

1 reference

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A new phylogenetic marker, apolipoprotein B, provides compelling evidence for eutherian relationships

7 April 2017

1 reference

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Assessing the Cretaceous superordinal divergence times within birds and placental mammals by using whole mitochondrial protein sequences and an extended statistical framework

7 April 2017

1 reference

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The earliest known eutherian mammal

7 April 2017

1 reference

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A phylogenetic foundation for comparative mammalian genomics

7 April 2017

1 reference

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Resolution of the early placental mammal radiation using Bayesian phylogenetics

7 April 2017

1 reference

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Molecular phylogenetics and the origins of placental mammals

7 April 2017

1 reference

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Evolutionary Rate at the Molecular Level

7 April 2017

1 reference

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Rooting the eutherian tree: the power and pitfalls of phylogenomics

7 April 2017

1 reference

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Genomics, biogeography, and the diversification of placental mammals

7 April 2017

1 reference

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Site specific rates of mitochondrial genomes and the phylogeny of eutheria

7 April 2017

1 reference

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Aligning multiple genomic sequences with the threaded blockset aligner

7 April 2017

1 reference

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Parallel adaptive radiations in two major clades of placental mammals

7 April 2017

1 reference

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Mobile DNA elements in primate and human evolution

7 April 2017

1 reference

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Phylogenomic data analyses provide evidence that Xenarthra and Afrotheria are sister groups

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

Evolutionary history of 7SL RNA-derived SINEs in Supraprimates

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

SINEs of speciation: tracking lineages with retroposons

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

A retroposon analysis of Afrotherian phylogeny

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

Evaluating placental inter-ordinal phylogenies with novel sequences including RAG1, gamma-fibrinogen, ND6, and mt-tRNA, plus MCMC-driven nucleotide, amino acid, and codon models

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

An ancient retrovirus-like element contains hot spots for SINE insertion

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

Higher taxonomic relationships among extant mammals based on morphology, with selected comparisons of results from molecular data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

A universal classification of eukaryotic transposable elements implemented in Repbase.

30 May 2018

1 reference

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SINEs of a nearly perfect character.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

Scoring pairwise genomic sequence alignments

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

Parsimony, likelihood, and the role of models in molecular phylogenetics

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675975

Mammalian Retroposons Integrate at Kinkable DNA Sites

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19261842

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.090647.108

1 reference

1 reference

1 reference

PubMed publication ID

19261842

1 reference