A rapid, generally applicable method to engineer zinc fingers illustrated by targeting the HIV-1 promoter (Q24649794)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

title

A rapid, generally applicable method to engineer zinc fingers illustrated by targeting the HIV-1 promoter (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

main subject

bioengineering

0 references

biomedical engineering

0 references

author

Mark Isalan

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

author name string

A Klug

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

Y Choo

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

language of work or name

English

0 references

publication date

1 July 2001

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

volume

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

issue

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

page(s)

656-660

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

describes a project that uses

9 November 2019

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2677679/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Positive and negative regulation of endogenous genes by designed transcription factors

1 reference

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Toward controlling gene expression at will: selection and design of zinc finger domains recognizing each of the 5'-GNN-3' DNA target sequences

7 April 2017

1 reference

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Design of polydactyl zinc-finger proteins for unique addressing within complex genomes

7 April 2017

1 reference

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Toward a code for the interactions of zinc fingers with DNA: selection of randomized fingers displayed on phage

7 April 2017

1 reference

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Building zinc fingers by selection: toward a therapeutic application

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Zif268 protein-DNA complex refined at 1.6 A: a model system for understanding zinc finger-DNA interactions

7 April 2017

1 reference

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In vivo repression by a site-specific DNA-binding protein designed against an oncogenic sequence

7 April 2017

1 reference

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Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Improved DNA binding specificity from polyzinc finger peptides by using strings of two-finger units

7 April 2017

1 reference

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Design of polyzinc finger peptides with structured linkers

28 September 2017

1 reference

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Regulation of an endogenous locus using a panel of designed zinc finger proteins targeted to accessible chromatin regions. Activation of vascular endothelial growth factor A.

28 September 2017

1 reference

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Insights into the molecular recognition of the 5'-GNN-3' family of DNA sequences by zinc finger domains

28 September 2017

1 reference

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Advances in zinc finger engineering.

28 September 2017

1 reference

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Synthetic zinc finger transcription factor action at an endogenous chromosomal site. Activation of the human erythropoietin gene

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Comprehensive DNA recognition through concerted interactions from adjacent zinc fingers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Recognition of DNA methylation by zinc fingers

28 September 2017

1 reference

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Getting a handhold on DNA: design of poly-zinc finger proteins with femtomolar dissociation constants.

28 September 2017

1 reference

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Synergy between adjacent zinc fingers in sequence-specific DNA recognition

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

A general strategy for selecting high-affinity zinc finger proteins for diverse DNA target sites

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Zinc finger phage: affinity selection of fingers with new DNA-binding specificities

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

In vitro selection of zinc fingers with altered DNA-binding specificity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Selection of DNA binding sites for zinc fingers using rationally randomized DNA reveals coded interactions

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Designing DNA-binding proteins on the surface of filamentous phage

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

A gene activated in mouse 3T3 cells by serum growth factors encodes a protein with "zinc finger" sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Zinc finger proteins as designer transcription factors.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Engineered zinc finger proteins that respond to DNA modification by HaeIII and HhaI methyltransferase enzymes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Analysis of zinc fingers optimized via phage display: evaluating the utility of a recognition code

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

From repression domains to designer zinc finger proteins: a novel strategy of intracellular immunization against HIV

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2677679

Physical basis of a protein-DNA recognition code

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11433278

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/90264

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

Dimensions Publication ID

9 November 2019

1032644172

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11433278 AND SRC:MED&resulttype=core&format=json

9 November 2019

PubMed publication ID

11433278

2 references