Structural and biochemical analyses of DNA and RNA binding by a bifunctional homing endonuclease and group I intron splicing factor (Q24630148)

1

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P Clint Spiegel

2

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Piyali Chatterjee

3

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Kristina L Brady

4

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Maureen E Downing

5

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Mark G Caprara

6

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Richard B Waring

Homing endonucleases: keeping the house in order

7

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language of work or name

English

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publication date

1 December 2003

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published in

Genes & Development

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volume

17

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issue

23

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page(s)

2875-88

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cites work

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A novel mechanism for protein-assisted group I intron splicing.

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Homing endonucleases: structure, function and evolution

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Statistical modeling and analysis of the LAGLIDADG family of site-specific endonucleases and identification of an intein that encodes a site-specific endonuclease of the HNH family

27 September 2017

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A protein encoded by a group I intron in Aspergillus nidulans directly assists RNA splicing and is a DNA endonuclease

27 September 2017

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Evolutionarily conserved and functionally important residues in the I-CeuI homing endonuclease

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Assembly of a ribonucleoprotein catalyst by tertiary structure capture

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Mechanisms of intron mobility.

27 September 2017

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Protein facilitation of group I intron splicing by assembly of the catalytic core and the 5' splice site domain

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27 September 2017

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27 September 2017

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27 September 2017

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Group I introns as mobile genetic elements: facts and mechanistic speculations--a review

27 September 2017

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Involvement of aminoacyl-tRNA synthetases and other proteins in group I and group II intron splicing

27 September 2017

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Defective splicing of mitochondrial rRNA in cytochrome-deficient nuclear mutants of Neurospora crassa

27 September 2017

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Characterization of Neurospora mitochondrial group I introns reveals different CYT-18 dependent and independent splicing strategies and an alternative 3' splice site for an intron ORF.

27 September 2017

1 reference

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Escherichia coli proteins, including ribosomal protein S12, facilitate in vitro splicing of phage T4 introns by acting as RNA chaperones

30 May 2018

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Conserved sequence features of inteins (protein introns) and their use in identifying new inteins and related proteins

30 May 2018

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Protein encoded by the third intron of cytochrome b gene in Saccharomyces cerevisiae is an mRNA maturase. Analysis of mitochondrial mutants, RNA transcripts proteins and evolutionary relationships

30 May 2018

1 reference

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In vitro analysis of the relationship between endonuclease and maturase activities in the bi-functional group I intron-encoded protein, I-AniI.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=289148

A comprehensive characterization of a group IB intron and its encoded maturase reveals that protein-assisted splicing requires an almost intact intron RNA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=289148

Interaction of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase (CYT-18 protein) with the group I intron P4-P6 domain. Thermodynamic analysis and the role of metal ions

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=289148

Modular organization of inteins and C‐terminal autocatalytic domains

28 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=289148

The maturase encoded by a group I intron from Aspergillus nidulans stabilizes RNA tertiary structure and promotes rapid splicing

28 November 2018

1 reference

12 December 2020

The missing nucleoside experiment: a new technique to study recognition of DNA by protein

1 reference

12 December 2020

Processing of X-ray diffraction data collected in oscillation mode

1 reference

12 December 2020

Involvement of Neurospora mitochondrial tyrosyl-tRNA synthetase in RNA splicing. A new method for purifying the protein and characterization of physical and enzymatic properties pertinent to splicing

1 reference

12 December 2020

A tyrosyl-tRNA synthetase protein induces tertiary folding of the group I intron catalytic core

1 reference

12 December 2020

Analysis of the CYT-18 protein binding site at the junction of stacked helices in a group I intron RNA by quantitative binding assays and in vitro selection

1 reference

12 December 2020

A tyrosyl-tRNA synthetase recognizes a conserved tRNA-like structural motif in the group I intron catalytic core

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12 December 2020

Identifiers

DOI

10.1101/GAD.1109003

1 reference

1 reference

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PubMed publication ID

14633971

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