YMDB: the Yeast Metabolome Database (Q24620625)

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16 January 2020

title

YMDB: the Yeast Metabolome Database (English)

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16 January 2020

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3

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16 January 2020

David Wishart

12

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16 January 2020

4

Yannick Djoumbou

1 reference

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16 January 2020

8

Rupasri Mandal

1 reference

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16 January 2020

2

Craig Knox

1 reference

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16 January 2020

author name string

Timothy Jewison

1

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16 January 2020

An Chi Guo

5

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16 January 2020

Jacqueline Lee

6

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16 January 2020

Philip Liu

7

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16 January 2020

Ram Krishnamurthy

9

1 reference

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16 January 2020

Igor Sinelnikov

10

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16 January 2020

Michael Wilson

11

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language of work or name

English

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publication date

7 November 2011

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16 January 2020

published in

Nucleic Acids Research

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volume

40

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issue

Database issue

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16 January 2020

page(s)

D815-20

1 reference

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Creative Commons Attribution-NonCommercial 3.0 Unported

16 January 2020

copyright license

start time

12 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

SMPDB: The Small Molecule Pathway Database

1 reference

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T3DB: a comprehensively annotated database of common toxins and their targets

7 April 2017

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KEGG for representation and analysis of molecular networks involving diseases and drugs

7 April 2017

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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

7 April 2017

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MetaboAnalyst: a web server for metabolomic data analysis and interpretation

7 April 2017

1 reference

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MetaboMiner--semi-automated identification of metabolites from 2D NMR spectra of complex biofluids

7 April 2017

1 reference

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HMDB: a knowledgebase for the human metabolome

7 April 2017

1 reference

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A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

7 April 2017

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ChEBI: a database and ontology for chemical entities of biological interest

7 April 2017

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DrugBank: a comprehensive resource for in silico drug discovery and exploration

7 April 2017

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Reactome: a knowledgebase of biological pathways

7 April 2017

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CYGD: the Comprehensive Yeast Genome Database

7 April 2017

1 reference

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The Universal Protein Resource (UniProt)

7 April 2017

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The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli

7 April 2017

1 reference

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FunSpec: a web-based cluster interpreter for yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245085

The Chemical Translation Service--a web-based tool to improve standardization of metabolomic reports

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245085

7 April 2017

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MassBank: a public repository for sharing mass spectral data for life sciences

7 April 2017

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The genetic landscape of a cell

7 April 2017

1 reference

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Mass-spectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245085

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245085

Metabolomics: An Integral Technique in Systems Biology

7 April 2017

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Saccharomyces Genome Database provides mutant phenotype data.

27 September 2017

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BioSpider: a web server for automating metabolome annotations.

27 September 2017

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Current progress in computational metabolomics

27 September 2017

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The Yeast Proteome Database (YPD): a model for the organization and presentation of genome-wide functional data

27 September 2017

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SGAM: an array-based approach for high-resolution genetic mapping in Saccharomyces cerevisiae

27 September 2017

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The global alcohol industry: an overview

28 November 2018

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Identification of bacteria using tandem mass spectrometry combined with a proteome database and statistical scoring

28 November 2018

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A highly sensitive selection method for directed evolution of homing endonucleases

28 November 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093/NAR/GKR916

inferred from DOI database lookup

7 January 2021

based on heuristic

SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1093/NAR/GKR916

Identifiers

DOI

10.1093/NAR/GKR916

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22064855 AND SRC:MED&resulttype=core&format=json

journals/nar/JewisonKNDGLLMKSWW12

16 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22064855 AND SRC:MED&resulttype=core&format=json

16 January 2020

PubMed publication ID

22064855

2 references