The twilight of Heliozoa and rise of Rhizaria, an emerging supergroup of amoeboid eukaryotes (Q24562628)

19 October 2023

9

Jan Pawlowski

Jan

Pawlowski

1 reference

19 October 2023

1

Sergey I Nikolaev

Sergey I

Nikolaev

1 reference

19 October 2023

3

José F Fahrni

José F

Fahrni

1 reference

19 October 2023

7

Vladimir V Aleshin

Vladimir V

Aleshin

1 reference

19 October 2023

Ignacio Bolivar

4

Ignacio

Bolivar

1 reference

19 October 2023

Stephane Polet

series ordinal

5

author given names

Stephane

author last names

Polet

1 reference

19 October 2023

Alexander P Mylnikov

series ordinal

6

author given names

Alexander P

author last names

Mylnikov

1 reference

19 October 2023

Nikolai B Petrov

series ordinal

8

author given names

Nikolai B

author last names

Petrov

1 reference

Proceedings of the National Academy of Sciences of the United States of America

19 October 2023

language of work or name

English

0 references

publication date

25 May 2004

0 references

published in

0 references

volume

101

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issue

21

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page(s)

8066-71

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cites work

The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Phylogenetic relationships between the Acantharea and the Polycystinea: a molecular perspective on Haeckel's Radiolaria

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

MRBAYES: Bayesian inference of phylogenetic trees

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Evolutionary trees from DNA sequences: A maximum likelihood approach

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Phylogeny and classification of phylum Cercozoa (Protozoa)

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

The root of the eukaryote tree pinpointed

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

SSU rRNA-based phylogenetic position of the genera Amoeba and Chaos (Lobosea, Gymnamoebia): the origin of gymnamoebae revisited

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

A revised six-kingdom system of life

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Testate amoebae in the Neoproterozoic Era: evidence from vase-shaped microfossils in the Chuar Group, Grand Canyon

24 March 2017

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

The deep roots of eukaryotes

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

A new method for calculating evolutionary substitution rates

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

The general stochastic model of nucleotide substitution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Small-subunit ribosomal RNA gene sequences of Phaeodarea challenge the monophyly of Haeckel's Radiolaria

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Cytoskeletal organization, phylogenetic affinities and systematics in the contentious taxon Excavata (Eukaryota).

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Two new small-subunit ribosomal RNA gene lineages within the subclass gymnamoebia

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Phylogeny of Choanozoa, Apusozoa, and Other Protozoa and Early Eukaryote Megaevolution

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Molecular phylogeny of centrohelid heliozoa, a novel lineage of bikont eukaryotes that arose by ciliary loss

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Autochthonous eukaryotic diversity in hydrothermal sediment and experimental microcolonizers at the Mid-Atlantic Ridge

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Benthic eukaryotic diversity in the Guaymas Basin hydrothermal vent environment.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

The molecular ecology of microbial eukaryotes unveils a hidden world

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

RadCon: phylogenetic tree comparison and consensus

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

The Diversity of Eukaryotes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Cladistic analyses of combined traditional and molecular data sets reveal an algal lineage.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Molecular evolutionary analyses of nuclear-encoded small subunit ribosomal RNA identify an independent rhizopod lineage containing the Euglyphina and the Chlorarachniophyta

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Early evolution and the origin of eukaryotes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Revised small subunit rRNA analysis provides further evidence that Foraminifera are related to Cercozoa

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Ultrastructure as a Control for Protistan Molecular Phylogeny

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Phylogeny of lobose amoebae based on actin and small-subunit ribosomal RNA genes

30 May 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

Toward the monophyly of Haeckel's radiolaria: 18S rRNA environmental data support the sisterhood of polycystinea and acantharea

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

The ribosomal database project.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

Confidence Limits on Phylogenies: an Approach using the Bootstrap

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

Molecular shredders: how proteasomes fulfill their role

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

Foraminifera and Cercozoa are related in actin phylogeny: two orphans find a home?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

Foraminifera and Cercozoa share a common origin according to RNA polymerase II phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

A Novel Polyubiquitin Structure in Cercozoa and Foraminifera: Evidence for a New Eukaryotic Supergroup

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

Vestigial chloroplasts in heterotrophic stramenopiles Pteridomonas danica and Ciliophrys infusionum (Dictyochophyceae).

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=419558

Eukaryotic Evolution: Getting to the Root of the Problem

28 November 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0308602101

Phylogenetic position of Gromia oviformis Dujardin inferred from nuclear-encoded small subunit ribosomal DNA

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/15148395

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Cell cycle, morphogenesis, and ultrastructure in the pseudoheliozoan clathrulina elegans

1 reference

https://pubmed.ncbi.nlm.nih.gov/15148395

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0308602101

1 reference

release_tlkngqlwnjfedbvysgq7azjyfq

0 references

0 references

2310628

1 reference

1 reference

2310628

1 reference