Proteomics of the chloroplast: systematic identification and targeting analysis of lumenal and peripheral thylakoid proteins (Q24540178)

27 April 2024

G Friso

2

G

Friso

1 reference

27 April 2024

D E Kalume

3

D E

Kalume

1 reference

27 April 2024

P Roepstorff

4

P

Roepstorff

1 reference

27 April 2024

F Nilsson

5

F

Nilsson

1 reference

27 April 2024

I Adamska

6

I

Adamska

1 reference

27 April 2024

K J van Wijk

7

K J

van Wijk

1 reference

Phosphate availability affects the thylakoid lipid composition and the expression of SQD1, a gene required for sulfolipid biosynthesis in Arabidopsis thaliana

27 April 2024

language of work or name

English

0 references

publication date

March 2000

0 references

published in

The Plant Cell

0 references

volume

12

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issue

3

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page(s)

319-41

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cites work

1 reference

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24 March 2017

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Sequence logos: a new way to display consensus sequences

24 March 2017

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Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

24 March 2017

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Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa

24 March 2017

1 reference

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Plastidic pathway of serine biosynthesis. Molecular cloning and expression of 3-phosphoserine phosphatase from Arabidopsis thaliana

24 March 2017

1 reference

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PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization

24 March 2017

1 reference

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AIR synthetase in cowpea nodules: a single gene product targeted to two organelles?

24 March 2017

1 reference

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A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

24 March 2017

1 reference

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ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites

7 April 2017

1 reference

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The extrinsic 33 kDa polypeptide of the oxygen-evolving complex of photosystem II is a putative calcium-binding protein and is encoded by a multi-gene family in pea.

7 April 2017

1 reference

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Alterations in the phenotype of plant cells studied by NH(2)-terminal amino acid-sequence analysis of proteins electroblotted from two-dimensional gel-separated total extracts.

27 September 2017

1 reference

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Component specificity for the thylakoidal Sec and Delta pH-dependent protein transport pathways

27 September 2017

1 reference

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Competition between Sec- and TAT-dependent protein translocation in Escherichia coli

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

High-throughput mass spectrometric discovery of protein post-translational modifications.

27 September 2017

1 reference

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A proteome analysis of livers from obese (ob/ob) mice treated with the peroxisome proliferator WY14,643.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Advances in protein solubilisation for two-dimensional electrophoresis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Protein import and routing systems of chloroplasts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Identification of proteins associated with plastoglobules isolated from pea (Pisum sativum L.) chloroplasts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Sample purification and preparation technique based on nano-scale reversed-phase columns for the sensitive analysis of complex peptide mixtures by matrix-assisted laser desorption/ionization mass spectrometry

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Protein phosphorylation and redox sensing in chloroplast thylakoids

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Arabidopsis thaliana: a model plant for genome analysis.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Identification of yeast proteins from two-dimensional gels: working out spot cross-contamination

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

A nuclear-encoded protein of prokaryotic origin is essential for the stability of photosystem II in Arabidopsis thaliana

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Electrospray-ionization mass spectrometry of intact intrinsic membrane proteins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

A chloroplast processing enzyme functions as the general stromal processing peptidase

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Use of thiourea to increase the solubility of membrane proteins in two-dimensional electrophoresis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

A novel multi-functional chloroplast protein: identification of a 40 kDa immunophilin-like protein located in the thylakoid lumen

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Metabolic compartmentation of plastid prenyllipid biosynthesis--evidence for the involvement of a multifunctional geranylgeranyl reductase

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Mass spectrometry and the age of the proteome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

A Ubiquitous Plant Housekeeping Gene, PAP, Encodes a Major Protein Component of Bell Pepper Chromoplasts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Postimport methylation of the small subunit of ribulose-1,5-bisphosphate carboxylase in chloroplasts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Probing protein function using a combination of gene knockout and proteome analysis by mass spectrometry

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Mass spectrometry in protein studies from genome to function

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Protein stability and degradation in chloroplasts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Molecular identification of zeaxanthin epoxidase of Nicotiana plumbaginifolia, a gene involved in abscisic acid biosynthesis and corresponding to the ABA locus of Arabidopsis thaliana.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Detection and characterization of a plastid envelope DNA-binding protein which may anchor plastid nucleoids

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Silver-staining of proteins in polyacrylamide gels: a general overview

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Partial deglycosylation of chloroplast coupling factor 1 (CF1) prevents the reconstitution of photophosphorylation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Intramembrane translocation and posttranslational palmitoylation of the chloroplast 32-kDa herbicide-binding protein

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Protein-electroblotting and -microsequencing strategies in generating protein data bases from two-dimensional gels

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Analysis of maize brittle-1 alleles and a defective Suppressor-mutator-induced mutable allele

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Information for targeting to the chloroplastic inner envelope membrane is contained in the mature region of the maize Bt1-encoded protein

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Light-stimulated transcription of genes for two chloroplast polypeptides in isolated pea leaf nuclei.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Regulation of gene expression in chloroplasts of higher plants

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

TAKs, thylakoid membrane protein kinases associated with energy transduction.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Alternatively spliced mRNA variants of chloroplast ascorbate peroxidase isoenzymes in spinach leaves.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Identifying proteins and post-translational modifications by mass spectrometry

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Isolation and characterization of monomeric and dimeric CP47-reaction center photosystem II complexes

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Improvement of the solubilization of proteins in two-dimensional electrophoresis with immobilized pH gradients

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Characterization of a ferritin mRNA from Arabidopsis thaliana accumulated in response to iron through an oxidative pathway independent of abscisic acid

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Substrate- and species-specific processing enzymes for chloroplast precursor proteins

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

'Catalysts' for polyacrylamide gel polymerization and detection of proteins by silver staining.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Ferritin accumulation and degradation in different organs of pea (Pisum sativum) during development

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Photosystem II 23 kDa polypeptide of oxygen-evolving complex is encoded by a multigene family in tobacco

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Molecular heterogeneity of ferredoxin-NADP reductase from spinach leaves

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Nucleoids of pea chloroplasts: microscopic and chemical characterization. Occurrence of histone-like proteins

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Synthesis of large subunit of ribulosebisphosphate carboxylase by thylakoid-bound polyribosomes from spinach chloroplasts.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Old and new pathways of protein export in chloroplasts and bacteria.

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Improved protein solubility in two-dimensional electrophoresis using tributyl phosphine as reducing agent.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Extraction of membrane proteins by differential solubilization for separation using two-dimensional gel electrophoresis

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Analysis of 1.9 Mb of contiguous sequence from chromosome 4 ofArabidopsis thaliana

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Stromal and thylakoid-bound ascorbate peroxidases are produced by alternative splicing in pumpkin.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Formation of the ferritin iron mineral occurs in plastids

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Evidence for the thiamine biosynthetic pathway in higher-plant plastids and its developmental regulation

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139834

Two-dimensional electrophoresis of plant proteins and standardization of gel patterns

29 November 2018

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12 December 2020

1 reference

12 December 2020

The spinach chloroplast chromosome is bound to the thylakoid membrane in the region of the inverted repeat

1 reference

12 December 2020

Molecular biology of gibberellin synthesis

1 reference

12 December 2020

Molecular chaperones are present in the thylakoid lumen of pea chloroplasts

1 reference

12 December 2020

Techview: biochemistry. Biomolecule mass spectrometry

1 reference

12 December 2020

Characterisation of an Arabidopsis thaliana cDNA encoding a novel thylakoid lumen protein imported by the ΔpH-dependent pathway

1 reference

12 December 2020

Transport of proteins into chloroplasts. The thylakoidal processing peptidase is a signal-type peptidase with stringent substrate requirements at the -3 and -1 positions

1 reference

12 December 2020

Subtle alteration of the active site of ribulose bisphosphate carboxylase/oxygenase by concerted site-directed mutagenesis and chemical modification

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12 December 2020

Arabidopsis mutants deficient in polyunsaturated fatty acid synthesis. Biochemical and genetic characterization of a plant oleoyl-phosphatidylcholine desaturase

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12 December 2020

The current state of two-dimensional electrophoresis with immobilized pH gradients

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12 December 2020

Purification and properties of a novel chloroplast stromal peptidase. Processing of polyphenol oxidase and other imported precursors

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12 December 2020

Sample application by in-gel rehydration improves the resolution of two-dimensional electrophoresis with immobilized pH gradients in the first dimension

1 reference

12 December 2020

The biogenesis and assembly of photosynthetic proteins in thylakoid membranes1

1 reference

12 December 2020

Construction of a directory of tobacco plasma membrane proteins by combined two-dimensional gel electrophoresis and protein sequencing

1 reference

12 December 2020

The thylakoid lumen of chloroplasts. Isolation and characterization

1 reference

12 December 2020

The maize brittle 1 gene encodes amyloplast membrane polypeptides

1 reference

12 December 2020

Functional genomics in plants

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12 December 2020

Import of proteins into chloroplasts. Membrane integration of a thylakoid precursor protein reconstituted in chloroplast lysates

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12 December 2020

Organization of the pathway of de novo pyrimidine nucleotide biosynthesis in pea (Pisum sativum L. cv Progress No. 9) leaves

1 reference

12 December 2020

release_5kollj7upvcbvep2u5q6p63isa

Identifiers

DOI

10.1105/TPC.12.3.319

0 references

Fatcat ID

0 references

PMC publication ID

139834

0 references