Barriers to intron promiscuity in bacteria (Q24524089)

3 July 2017

1 reference

title

Barriers to intron promiscuity in bacteria (English)

1 reference

3 July 2017

0 references

D R Edgell

1

1 reference

3 July 2017

M Belfort

series ordinal

2

1 reference

3 July 2017

D A Shub

series ordinal

3

1 reference

3 July 2017

language of work or name

English

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publication date

1 October 2000

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3 July 2017

published in

Journal of Bacteriology

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3 July 2017

volume

182

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3 July 2017

issue

19

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3 July 2017

page(s)

5281-5289

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Homing endonucleases: keeping the house in order

3 July 2017

cites work

1 reference

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Splicing of a group II intron involved in the conjugative transfer of pRS01 in lactococci

24 March 2017

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The DNA polymerase genes of several HMU-bacteriophages have similar group I introns with highly divergent open reading frames

24 March 2017

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Structural conservation among three homologous introns of bacteriophage T4 and the group I introns of eukaryotes

24 March 2017

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Intron mobility in phage T4 is dependent upon a distinctive class of endonucleases and independent of DNA sequences encoding the intron core: mechanistic and evolutionary implications

24 March 2017

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Ironing out the kinks: splicing and translation in bacteria

24 March 2017

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Introns as mobile genetic elements

24 March 2017

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A group II intron RNA is a catalytic component of a DNA endonuclease involved in intron mobility

24 March 2017

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The catalytic mechanism and structure of thymidylate synthase

24 March 2017

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Comparative and functional anatomy of group II catalytic introns—a review

24 March 2017

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Widespread distribution of a group I intron and its three deletion derivatives in the lysin gene of Streptococcus thermophilus bacteriophages

24 March 2017

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Intron homing with limited exon homology. Illegitimate double-strand-break repair in intron acquisition by phage t4.

27 September 2017

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Role of exonucleolytic degradation in group I intron homing in phage T4

27 September 2017

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Homing endonucleases: structure, function and evolution

27 September 2017

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An unspliced group I intron in 23S rRNA links Chlamydiales, chloroplasts, and mitochondria.

27 September 2017

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Unexpected abundance of self-splicing introns in the genome of bacteriophage Twort: introns in multiple genes, a single gene with three introns, and exon skipping by group I ribozymes

27 September 2017

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Configuration of the catalytic GIY-YIG domain of intron endonuclease I-TevI: coincidence of computational and molecular findings

27 September 2017

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Complete sequence of a 184-kilobase catabolic plasmid from Sphingomonas aromaticivorans F199.

27 September 2017

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Sporadic distribution of tRNA(Arg)CCU introns among alpha-purple bacteria: evidence for horizontal transmission and transposition of a group I intron.

27 September 2017

1 reference

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Sequence specificity of in vivo reverse splicing of the Tetrahymena group I intron

27 September 2017

1 reference

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A ribosomal function is necessary for efficient splicing of the T4 phage thymidylate synthase intron in vivo

27 September 2017

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Integration of the Tetrahymena group I intron into bacterial rRNA by reverse splicing in vivo

27 September 2017

1 reference

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Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPβ

27 September 2017

1 reference

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A bacterial group II intron encoding reverse transcriptase, maturase, and DNA endonuclease activities: biochemical demonstration of maturase activity and insertion of new genetic information within the intron

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Origin and evolution of group I introns in cyanobacterial tRNA genes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Homing of a group II intron from Lactococcus lactis subsp. lactis ML3

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Splicing of a group II intron in a functional transfer gene of Lactococcus lactis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Efficient integration of an intron RNA into double-stranded DNA by reverse splicing

27 September 2017

1 reference

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Beyond homing: competition between intron endonucleases confers a selective advantage on flanking genetic markers

27 September 2017

1 reference

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Retrohoming: cDNA-mediated mobility of group II introns requires a catalytic RNA.

27 September 2017

1 reference

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Mechanisms of intron mobility.

27 September 2017

1 reference

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The td intron endonuclease I-TevI makes extensive sequence-tolerant contacts across the minor groove of its DNA target

27 September 2017

1 reference

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mRNA splicing and autocatalytic introns: distant cousins or the products of chemical determinism?

27 September 2017

1 reference

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Group I and group II introns

27 September 2017

1 reference

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Evidence for a group II intron in Escherichia coli inserted into a highly conserved reading frame associated with mobile DNA sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

An intron in the thymidylate synthase gene of Bacillus bacteriophage beta 22: evidence for independent evolution of a gene, its group I intron, and the intron open reading frame

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Self-splicing group I and group II introns encode homologous (putative) DNA endonucleases of a new family

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Structure and activities of group II introns

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Self-splicing group I intron in cyanobacterial initiator methionine tRNA: evidence for lateral transfer of introns in bacteria

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Intervening sequence in the thymidylate synthase gene of bacteriophage T4

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

An intron-encoded protein is active in a gene conversion process that spreads an intron into a mitochondrial gene

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Reverse self-splicing of the tetrahymena group I intron: implication for the directionality of splicing and for intron transposition

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Bacteriophage introns: parasites within parasites?

27 September 2017

1 reference

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The inconsistent distribution of introns in the T-even phages indicates recent genetic exchanges

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Mobile introns: definition of terms and recommended nomenclature

27 September 2017

1 reference

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Characterization of I-Ppo, an intron-encoded endonuclease that mediates homing of a group I intron in the ribosomal DNA of Physarum polycephalum

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

A self-splicing group I intron in the DNA polymerase gene of Bacillus subtilis bacteriophage SPO1.

27 September 2017

1 reference

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The phage T4 nrdB intron: a deletion mutant of a version found in the wild

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Self-splicing introns in tRNA genes of widely divergent bacteria

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Repair of DNA double-strand breaks in Escherichia coli, which requires recA function and the presence of a duplicate genome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Structure analysis of a class II transposon encoding the mercury resistance of the Gram-positive Bacterium bacillus megaterium MB1, a strain isolated from minamata bay, Japan

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Characterization and splicing in vivo of a Sinorhizobium meliloti group II intron associated with particular insertion sequences of the IS630-Tc1/IS3 retroposon superfamily

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Unusual insertion element polymorphisms in the promoter and terminator regions of the mucAB-like genes of R471a and R446b

30 May 2018

1 reference

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Cyanobacterial tRNALeu(UAA) group I introns have polyphyletic origin

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Group II intron from Pseudomonas alcaligenes NCIB 9867 (P25X): entrapment in plasmid RP4 and sequence analysis

30 May 2018

1 reference

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A group II intron in a conjugative transposon from the gram-positive bacterium, Clostridium difficile

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Amino acid sequence motif of group I intron endonucleases is conserved in open reading frames of group II introns

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Multiple self-splicing introns in bacteriophage T4: evidence from autocatalytic GTP labeling of RNA in vitro

30 May 2018

1 reference

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The mitochondrial URF1 gene in Neurospora crassa has an intron that contains a novel type of URF.

30 May 2018

1 reference

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A family of autocatalytic group I introns in bacteriophage T4.

30 May 2018

1 reference

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Intron mobility in the T-even phages: high frequency inheritance of group I introns promoted by intron open reading frames.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

An ancient group I intron shared by eubacteria and chloroplasts

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Trans and cis requirements for intron mobility in a prokaryotic system

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Retrohoming of a bacterial group II intron: mobility via complete reverse splicing, independent of homologous DNA recombination

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Recombinational exchanges at the capsular polysaccharide biosynthetic locus lead to frequent serotype changes among natural isolates of Streptococcus pneumoniae

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Association of a group I intron with its splice junction in 50S ribosomes: implications for intron toxicity.

29 November 2018

1 reference

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Translation across the 5'-splice site interferes with autocatalytic splicing

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Transposition of a group II intron

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

Multiple group II self-splicing introns in mobile DNA from Escherichia coli.

29 November 2018

1 reference

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Group II self-splicing introns in bacteria

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110968

A group I intron in the terminase gene of Lactobacillus delbrueckii subsp. lactis phage LL-H.

29 November 2018

1 reference

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Two intron sequences in yeast mitochondrial COX1 gene: homology among URF-containing introns and strain-dependent variation in flanking exons

29 November 2018

1 reference

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Genes within genes: independent expression of phage T4 intron open reading frames and the genes in which they reside

29 November 2018

1 reference

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Analysis of class I introns in a mitochondrial plasmid associated with senescence of Podospora anserina reveals extraordinary resemblance to the Tetrahymena ribosomal intron

29 November 2018

1 reference

12 December 2020

Bacterial origin of a chloroplast intron: conserved self-splicing group I introns in cyanobacteria

1 reference

12 December 2020

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12 December 2020

RNA and protein catalysis in group II intron splicing and mobility reactions using purified components

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12 December 2020

On the structure of the glucosylated hydroxymethylcytosine nucleotides of coliphages T2, T4, and T6

1 reference

12 December 2020

Structural parsimony in endonuclease active sites: should the number of homing endonuclease families be redefined?

1 reference

12 December 2020

Erratum: Retrotransposition of a bacterial group II intron

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12 December 2020

Regulation of intron function: efficient splicing in vivo of a bacterial group II intron requires a functional promoter within the intron

1 reference

12 December 2020

Why introns-in-pieces?

1 reference

12 December 2020

Transposition of group II intron al1 in yeast and invasion of mitochondrial genes at new locations

1 reference

12 December 2020

Intron-containing T4 bacteriophage gene sunY encodes an anaerobic ribonucleotide reductase

1 reference

12 December 2020

Selection of a remote cleavage site by I-tevI, the td intron-encoded endonuclease

1 reference

12 December 2020

Group II intron mobility occurs by target DNA-primed reverse transcription

1 reference

12 December 2020

Intron-encoded Endonuclease I-TevII Binds Across the Minor Groove and Induces Two Distinct Conformational Changes in its DNA Substrate

1 reference

12 December 2020

Intron mobility in phage T4 occurs in the context of recombination-dependent DNA replication by way of multiple pathways

1 reference

12 December 2020

Mobility of yeast mitochondrial group II introns: engineering a new site specificity and retrohoming via full reverse splicing

1 reference

12 December 2020

Genetic exchanges between bacteriophage T4 and filamentous fungi?

1 reference

12 December 2020

10.1128/JB.182.19.5281-5289.2000

Identifiers

DOI

1 reference

OpenCitations bibliographic resource ID

3 July 2017

4348128

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4348128

1 reference