Protein Tpr is required for establishing nuclear pore-associated zones of heterochromatin exclusion (Q24307496)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20407419 AND SRC:MED&resulttype=core&format=json

31 January 2020

title

Protein Tpr is required for establishing nuclear pore-associated zones of heterochromatin exclusion (English)

1 reference

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31 January 2020

1 reference

GOA release 2020-03-11

Translocated promoter region, nuclear basket protein

1 reference

Nucleoporin 98 and 96 precursor

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

author

Helene Norder

6

1 reference

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31 January 2020

author name string

Sandra Krull

1

1 reference

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31 January 2020

Julia Dörries

2

1 reference

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31 January 2020

Björn Boysen

3

1 reference

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31 January 2020

Sonja Reidenbach

4

1 reference

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31 January 2020

Lars Magnius

5

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31 January 2020

Johan Thyberg

7

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31 January 2020

Volker C Cordes

8

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31 January 2020

language of work or name

English

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publication date

20 April 2010

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31 January 2020

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31 January 2020

volume

29

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31 January 2020

issue

10

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31 January 2020

page(s)

1659-1673

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describes a project that uses

31 January 2020

ImageJ

1 reference

11 June 2022

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inferred from PubMed Central ID database lookup

cites work

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Tpr directly binds to Mad1 and Mad2 and is important for the Mad1-Mad2-mediated mitotic spindle checkpoint

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Extracellular signal-regulated kinase 2 (ERK2) phosphorylation sites and docking domain on the nuclear pore complex protein Tpr cooperatively regulate ERK2-Tpr interaction

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HSF1-TPR interaction facilitates export of stress-induced HSP70 mRNA

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Nucleoporins as components of the nuclear pore complex core structure and Tpr as the architectural element of the nuclear basket

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Direct interaction with nup153 mediates binding of Tpr to the periphery of the nuclear pore complex

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Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded

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Nup98 localizes to both nuclear and cytoplasmic sides of the nuclear pore and binds to two distinct nucleoporin subcomplexes

19 March 2017

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Nucleocytoplasmic transport of proteins and poly(A) RNA in reconstituted Tpr-less nuclei in living mammalian cells

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Tpr is localized within the nuclear basket of the pore complex and has a role in nuclear protein export

19 March 2017

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Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export

19 March 2017

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The nucleoporin Nup153 is required for nuclear pore basket formation, nuclear pore complex anchoring and import of a subset of nuclear proteins

19 March 2017

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Amino acid substitutions of coiled-coil protein Tpr abrogate anchorage to the nuclear pore complex but not parallel, in-register homodimerization

19 March 2017

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Functional analysis of Tpr: identification of nuclear pore complex association and nuclear localization domains and a role in mRNA export

19 March 2017

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Molecular segments of protein Tpr that confer nuclear targeting and association with the nuclear pore complex

19 March 2017

1 reference

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Major binding sites for the nuclear import receptor are the internal nucleoporin Nup153 and the adjacent nuclear filament protein Tpr

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Identification of protein p270/Tpr as a constitutive component of the nuclear pore complex-attached intranuclear filaments

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

The peptide repeat domain of nucleoporin Nup98 functions as a docking site in transport across the nuclear pore complex

19 March 2017

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Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells

19 March 2017

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Perinuclear Mlp proteins downregulate gene expression in response to a defect in mRNA export

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Yeast nuclear pore complexes have a cytoplasmic ring and internal filaments.

19 March 2017

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Nuclear retention of unspliced mRNAs in yeast is mediated by perinuclear Mlp1.

19 March 2017

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The C-terminal domain of myosin-like protein 1 (Mlp1p) is a docking site for heterogeneous nuclear ribonucleoproteins that are required for mRNA export

19 March 2017

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Exporting RNA from the nucleus to the cytoplasm

19 March 2017

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The evolutionarily conserved single-copy gene for murine Tpr encodes one prevalent isoform in somatic cells and lacks paralogs in higher eukaryotes

19 March 2017

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The path of RNA through nuclear pores: apparent entry from the sides into specialized pores

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A nuclear pore complex protein that contains zinc finger motifs, binds DNA, and faces the nucleoplasm

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Molecular crowding affects diffusion and binding of nuclear proteins in heterochromatin and reveals the fractal organization of chromatin

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Karyopherin binding interactions and nuclear import mechanism of nuclear pore complex protein Tpr

27 September 2017

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Mlp1 acts as a mitotic scaffold to spatially regulate spindle assembly checkpoint proteins in Aspergillus nidulans

27 September 2017

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27 September 2017

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27 September 2017

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27 September 2017

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27 September 2017

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Gene regulation through nuclear organization.

27 September 2017

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Dynamic organization of the cell nucleus.

27 September 2017

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Packing of the polynucleosome chain in interphase chromosomes: evidence for a contribution of crowding and entropic forces

27 September 2017

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Beyond the sequence: cellular organization of genome function

27 September 2017

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Transcriptional regulation at the nuclear pore complex

27 September 2017

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Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions

27 September 2017

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27 September 2017

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Cotranscriptional recruitment to the mRNA export receptor Mex67p contributes to nuclear pore anchoring of activated genes

27 September 2017

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Chromosome territories--a functional nuclear landscape.

27 September 2017

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The X chromosome is organized into a gene-rich outer rim and an internal core containing silenced nongenic sequences

27 September 2017

1 reference

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Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila

27 September 2017

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Nucleocytoplasmic traffic disorder induced by cardioviruses.

27 September 2017

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Nuclear envelope breakdown is coordinated by both Nup358/RanBP2 and Nup153, two nucleoporins with zinc finger modules

27 September 2017

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Caspases target only two architectural components within the core structure of the nuclear pore complex

27 September 2017

1 reference

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Nup153 affects entry of messenger and ribosomal ribonucleoproteins into the nuclear basket during export

27 September 2017

1 reference

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Developmentally induced changes in transcriptional program alter spatial organization across chromosomes

27 September 2017

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Concepts in nuclear architecture

27 September 2017

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Mobility of multi-subunit complexes in the nucleus: accessibility and dynamics of chromatin subcompartments.

27 September 2017

1 reference

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Nuclear RNAs confined to a reticular compartment between chromosome territories

27 September 2017

1 reference

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Internal organisation of the nucleus: assembly of compartments by macromolecular crowding and the nuclear matrix model

27 September 2017

1 reference

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Bidirectional increase in permeability of nuclear envelope upon poliovirus infection and accompanying alterations of nuclear pores.

27 September 2017

1 reference

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The nuclear pore complex: a jack of all trades?

27 September 2017

1 reference

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Distinct functional domains within nucleoporins Nup153 and Nup98 mediate transcription-dependent mobility.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Further observations on the nuclear envelope of the animal cell

27 September 2017

1 reference

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Structure in nucleated erythrocytes

27 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

The principles of nuclear structure

27 September 2017

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Condensed chromatin domains in the mammalian nucleus are accessible to large macromolecules

27 September 2017

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Short interfering RNA confers intracellular antiviral immunity in human cells

27 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Nup98 is a mobile nucleoporin with transcription-dependent dynamics

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

The vertebrate nuclear pore complex: from structure to function.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Fishing out proteins that bind to titin

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Nuclear compartmentalization and gene activity

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Effects of poliovirus infection on nucleo-cytoplasmic trafficking and nuclear pore complex composition.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Experimental observations of a nuclear matrix

27 September 2017

1 reference

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High resolution analysis of interphase chromosome domains

27 September 2017

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Nup124p is a nuclear pore factor of Schizosaccharomyces pombe that is important for nuclear import and activity of retrotransposon Tf1.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Amino-terminal sequences that direct nucleoporin nup153 to the inner surface of the nuclear envelope

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Translational Diffusion of Macromolecule-sized Solutes in Cytoplasm and Nucleus

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

DNA binding domain and subunit interactions of transcription factor IIIC revealed by dissection with poliovirus 3C protease

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Evidence for a nuclear compartment of transcription and splicing located at chromosome domain boundaries

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

High-resolution field emission scanning electron microscope imaging of internal cell structures after Epon extraction from sections: a new approach to correlative ultrastructural and immunocytochemical studies

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Reconstituted nuclei depleted of a vertebrate GLFG nuclear pore protein, p97, import but are defective in nuclear growth and replication

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Computer Averaging of Electron Micrographs of 40 S Ribosomal Subunits

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

RNA transport from nucleus to cytoplasm in Chironomus salivary glands

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Fine structural alterations of interphase nuclei of lymphocytes stimulated to grwoth activity in vitro

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Structural changes in nuclear envelopes during elongation of heart muscle cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

On the octagonality of the nuclear pore complex

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Electron-microscope observations on the organization of the nucleus in chicken erythrocytes and a superunit thread hypothesis for chromosome structure.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Virus replication, cytopathology, and lysosomal enzyme response of mitotic and interphase Hep-2 cells infected with poliovirus

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Electron microscopic observations on the large subunit of the rat liver ribosome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

The nuclear envelope and the organization of the pore complexes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Toward a more complete 3-D structure of the nuclear pore complex

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Infection of HeLa cells with poliovirus results in modification of a complex that binds to the rRNA promoter

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

The nuclear and the cytoplasmic pore complex: structure, dynamics, distribution, and evolution

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

An octamer of histones in chromatin and free in solution

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Fibrils attached to the nuclear pore prevent egress of SV40 particles from the infected nucleus

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Three-dimensional reconstruction of the chromatin bodies in the nuclei of mature erythrocytes from the newt Triturus cristatus: the number of nuclear envelope-attachment sites

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

High‐resolution field‐emission scanning electron microscopy of nuclear pore complex

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Nuclear pore complex structure in birds.

30 May 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

30 May 2018

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

Three-dimensional analysis of the arrangement of compact chromatin in the nucleus of G0 rat lymphocytes.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Inhibition of transcription factor activity by poliovirus

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Structure of liver ribosomes studied by negative staining

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Immunolocalization of lamins in the thick nuclear lamina of human synovial cells.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

The effect of poliovirus proteinase 2Apro expression on cellular metabolism. Inhibition of DNA replication, RNA polymerase II transcription, and translation

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

The human tpr gene encodes a protein of 2094 amino acids that has extensive coiled-coil regions and an acidic C-terminal domain

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Domain-specific antibodies reveal multiple-site topology of Nup153 within the nuclear pore complex

30 May 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

Histone acetylation increases chromatin accessibility

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

RNP export is mediated by structural reorganization of the nuclear pore basket.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

Monitoring the permeability of the nuclear envelope during the cell cycle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

Opposing temperature responses to intrahypothalamic injections of 5-hydroxytryptamine in the pigeon exposed to cold

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

Cleavage of Transcriptional Activator Oct-1 by Poliovirus Encoded Protease 3Cpro

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

Nuclear Pore Complex Structure and Dynamics Revealed by Cryoelectron Tomography

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

Nuclear alterations in autosomal-dominant Emery-Dreifuss muscular dystrophy

21 January 2018

2 references

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

21 January 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Transport of Balbiani ring granules through nuclear pores in Chironomus tentans

29 November 2018

1 reference

https://api.crossref.org/works/10.1038/EMBOJ.2010.54

A Drosophila Tpr protein homolog is localized both in the extrachromosomal channel network and to nuclear pore complexes.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2876962

Studies on the ultrastructure of nucleoli in human smooth muscle cells

29 November 2018

1 reference

12 December 2020

Distribution of nuclear pores and chromatin organization in neurons and glial cells of the rat cerebellar cortex

1 reference

12 December 2020

Studies on nuclear fine structure

1 reference

12 December 2020

A serial section study of nuclear pockets containing nuclear material

1 reference

12 December 2020

Actively transcribed GAL genes can be physically linked to the nuclear pore by the SAGA chromatin modifying complex

1 reference

12 December 2020

Role of Chromosome Territories in the Functional Compartmentalization of the Cell Nucleus

1 reference

12 December 2020

Ultrastructure of mammalian venous capillaries, venules, and small collecting veins

1 reference

12 December 2020

Identifiers

DOI

10.1038/EMBOJ.2010.54

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20407419 AND SRC:MED&resulttype=core&format=json

31 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20407419 AND SRC:MED&resulttype=core&format=json

31 January 2020

PubMed publication ID

20407419

2 references