Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome (Q21994448)

12 September 2022

9

Eugene V Koonin

Eugene V

Koonin

1 reference

12 September 2022

19

Patrick Wincker

Patrick

Wincker

1 reference

12 September 2022

4

François Artiguenave

François

Artiguenave

1 reference

12 September 2022

6

Valérie Barbe

Valérie

Barbe

1 reference

12 September 2022

13

Sophie Oztas

Sophie

Oztas

1 reference

12 September 2022

3

Frédéric Partensky

Frédéric

Partensky

1 reference

12 September 2022

14

Catherine Robert

Catherine

Robert

1 reference

12 September 2022

2

Marcel Salanoubat

Marcel

Salanoubat

1 reference

12 September 2022

Alexis Dufresne

1

Alexis

Dufresne

1 reference

12 September 2022

Ilka M Axmann

5

Ilka M

Axmann

1 reference

12 September 2022

David J Scanlan

16

David J

Scanlan

1 reference

12 September 2022

Igor B Rogozin

15

Igor B

Rogozin

1 reference

12 September 2022

Michael Y Galperin

8

Michael Y

Galperin

1 reference

12 September 2022

20

Yuri I Wolf

Yuri I

Wolf

1 reference

12 September 2022

11

Kira S Makarova

Kira S

Makarova

1 reference

12 September 2022

7

Simone

Duprat

Simone Duprat

1 reference

12 September 2022

Florence Le Gall

10

Florence

Le Gall

1 reference

12 September 2022

Martin Ostrowski

series ordinal

12

author given names

Martin

author last names

Ostrowski

1 reference

12 September 2022

Nicole Tandeau de Marsac

series ordinal

17

author given names

Nicole

author last names

Tandeau de Marsac

1 reference

12 September 2022

Wolfgang R Hess

series ordinal

21

author given names

Wolfgang R

author last names

Hess

1 reference

Proceedings of the National Academy of Sciences of the United States of America

12 September 2022

language of work or name

English

0 references

publication date

19 August 2003

0 references

published in

0 references

volume

100

0 references

issue

17

0 references

page(s)

10020-5

0 references

cites work

Functional genomic analysis of the HY2 family of ferredoxin-dependent bilin reductases from oxygenic photosynthetic organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Prochlorococcus, a marine photosynthetic prokaryote of global significance

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Improved microbial gene identification with GLIMMER

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

The COG database: a tool for genome-scale analysis of protein functions and evolution

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

CO2 concentrating mechanisms in cyanobacteria: molecular components, their diversity and evolution

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

An alternative flavin-dependent mechanism for thymidylate synthesis

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

The Minimal Gene Complement of Mycoplasma genitalium

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Sequence Analysis of the Genome of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC6803. II. Sequence Determination of the Entire Genome and Assignment of Potential Protein-coding Regions

19 March 2017

2 references

https://api.crossref.org/works/10.1073/PNAS.1733211100

22 April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Novel domains of the prokaryotic two-component signal transduction systems

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

CRITICA: coding region identification tool invoking comparative analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Molecular ecology of the marine cyanobacterial genera Prochlorococcus and Synechococcus

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Experimental verification of a sequence-based prediction: F(1)F(0)-type ATPase of Vibrio cholerae transports protons, not Na( ) ions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Isolation of the gene for the B12-dependent ribonucleotide reductase from Anabaena sp. strain PCC 7120 and expression in Escherichia coli

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Cellular differentiation in the cyanobacterium Nostoc punctiforme

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

The role of lineage-specific gene family expansion in the evolution of eukaryotes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Light regulation of type IV pilus-dependent motility by chemosensor-like elements in Synechocystis PCC6803.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Genomic exploration of the hemiascomycetous yeasts: 2. Data generation and processing

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Another unusual type of citric acid cycle enzyme in Helicobacter pylori: the malate:quinone oxidoreductase

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Cloning and functional expression of the gene encoding the key enzyme for chlorophyll b biosynthesis (CAO) from Arabidopsis thaliana

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Multiplication of antenna genes as a major adaptation to low light in a marine prokaryote

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

A novel nitrate/nitrite permease in the marine Cyanobacterium synechococcus sp. strain PCC 7002

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Chlorophyll a oxygenase (CAO) is involved in chlorophyll b formation from chlorophyll a

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Analogous enzymes: independent inventions in enzyme evolution

12 September 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

12 September 2017

https://api.crossref.org/works/10.1073/PNAS.1733211100

inferred from DOI database lookup

7 January 2021

based on heuristic

Independent evolution of the prochlorophyte and green plant chlorophyll a/b light-harvesting proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Experimental and computational analysis of transcriptional start sites in the cyanobacterium Prochlorococcus MED4.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

High rate of uptake of organic nitrogen compounds by Prochlorococcus cyanobacteria as a key to their dominance in oligotrophic oceanic waters

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Acquisition of a new type of fructose-1,6-bisphosphatase with resistance to hydrogen peroxide in cyanobacteria: molecular characterization of the enzyme from Synechocystis PCC 6803.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Genetic analysis of chlorophyll biosynthesis

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Compilation of all genes encoding bacterial two-component signal transducers in the genome of the cyanobacterium, Synechocystis sp. strain PCC 6803.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Molecular characterization of ferredoxin-NADP oxidoreductase in cyanobacteria: cloning and sequence of the petH gene of Synechococcus sp. PCC 7002 and studies on the gene product

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187748

Prochlorococcus marinus nov. gen. nov. sp.: an oxyphototrophic marine prokaryote containing divinyl chlorophyll a and b

30 May 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

The pigments of Prochlorococcus marinus: The presence of divinylchlorophyll a and b in a marine procaryote

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

A small and compact genome in the marine cyanobacterium Prochlorococcus marinus CCMP 1375: lack of an intron in the gene for tRNA(Leu)(UAA) and a single copy of the rRNA operon

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

An unusual gene arrangement for the putative chromosome replication origin and circadian expression of dnaN in Synechococcus sp. strain PCC 7942.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

Analysis of the hli gene family in marine and freshwater cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

Purification, characterization, and gene expression of all sigma factors of RNA polymerase in a cyanobacterium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

Characterization of Genes Encoding Multi-domain Proteins in the Genome of the Filamentous Nitrogen-fixing Cyanobacterium Anabaena sp. Strain PCC 7120

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

Homology of the N-terminal domain of the petH gene product from Anabaena sp. PCC 7119 to the CpcD phycobilisome linker polypeptide

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

The photosynthetic apparatus of Prochlorococcus: Insights through comparative genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

Phycoerythrins of the oxyphotobacterium Prochlorococcus marinus are associated to the thylakoid membrane and are encoded by a single large gene cluster

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

Rapid diversification of marine picophytoplankton with dissimilar light-harvesting structures inferred from sequences of Prochlorococcus and Synechococcus (Cyanobacteria).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

Two CO2 uptake systems in cyanobacteria: four systems for inorganic carbon acquisition in Synechocystis sp. strain PCC6803

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

inferred from DOI database lookup

7 January 2021

based on heuristic

Photophysiology of the marine cyanobacterium Prochlorococcus: Ecotypic differences among cultured isolates

1 reference

https://api.crossref.org/works/10.1073/PNAS.1733211100

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1073/PNAS.1733211100

1 reference

ADS bibcode

2003PNAS..10010020D

0 references

1 reference

1 reference

1 reference