Inferring loss-of-heterozygosity from unpaired tumors using high-density oligonucleotide SNP arrays (Q21563517)

11 September 2022

11

Aurelien Descazeaud

Aurelien

Descazeaud

1 reference

11 September 2022

Mark A Rubin

12

Mark A

Rubin

1 reference

11 September 2022

13

Matthew Meyerson

Matthew

Meyerson

1 reference

11 September 2022

6

Levi A Garraway

Levi A

Garraway

1 reference

11 September 2022

1

Rameen Beroukhim

Rameen

Beroukhim

1 reference

11 September 2022

Ming Lin

2

Ming

Lin

1 reference

11 September 2022

Yuhyun Park

3

Yuhyun

Park

1 reference

11 September 2022

Ke Hao

4

Ke

Hao

1 reference

11 September 2022

Xiaojun Zhao

5

Xiaojun

Zhao

1 reference

11 September 2022

Edward A Fox

7

Edward A

Fox

1 reference

11 September 2022

Ephraim P Hochberg

8

Ephraim P

Hochberg

1 reference

11 September 2022

Ingo K Mellinghoff

9

Ingo K

Mellinghoff

1 reference

11 September 2022

Matthias D Hofer

10

Matthias D

Hofer

1 reference

11 September 2022

William R Sellers

15

William R

Sellers

1 reference

11 September 2022

Cheng Li

16

Cheng

Li

1 reference

PLOS Computational Biology

11 September 2022

language of work or name

English

0 references

publication date

May 2006

0 references

published in

0 references

volume

2

0 references

issue

5

0 references

page(s)

e41

0 references

copyright license

Creative Commons Attribution 4.0 International

start time

12 May 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A haplotype map of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Mutation and cancer: statistical study of retinoblastoma

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Two genetic hits (more or less) to cancer

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Prediction of complete gene structures in human genomic DNA

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Genome-wide detection of allelic imbalance using human SNPs and high-density DNA arrays

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Whole genome DNA copy number changes identified by high density oligonucleotide arrays

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Genome coverage and sequence fidelity of phi29 polymerase-based multiple strand displacement whole genome amplification

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Parallel genotyping of over 10,000 SNPs using a one-primer assay on a high-density oligonucleotide array

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

High-resolution analysis of DNA copy number using oligonucleotide microarrays

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Pooled analysis of loss of heterozygosity in breast cancer: a genome scan provides comparative evidence for multiple tumor suppressors and identifies novel candidate regions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Genome-wide loss of heterozygosity analysis from laser capture microdissected prostate cancer using single nucleotide polymorphic allele (SNP) arrays and a novel bioinformatics platform dChipSNP.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Localization of multiple melanoma tumor-suppressor genes on chromosome 11 by use of homozygosity mapping-of-deletions analysis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

On the statistical analysis of allelic-loss data

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Construction of multilocus genetic linkage maps in humans

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Allelic imbalance analysis by high-density single-nucleotide polymorphic allele (SNP) array with whole genome amplified DNA.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

High-resolution single-nucleotide polymorphism array and clustering analysis of loss of heterozygosity in human lung cancer cell lines

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Stochastic models for heterogeneous DNA sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Algorithms for large-scale genotyping microarrays

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

High-throughput molecular analysis of urine sediment for the detection of bladder cancer by high-density single-nucleotide polymorphism array

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Large-scale genotyping of complex DNA.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Evidence for whole chromosome 6 loss and duplication of the remaining chromosome in acute lymphoblastic leukemia

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Genome-wide allelotyping of lung cancer identifies new regions of allelic loss, differences between small cell lung cancer and non-small cell lung cancer, and loci clustering.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1458964

Loss-of-heterozygosity analysis of small-cell lung carcinomas using single-nucleotide polymorphism arrays

29 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/16699863

12 December 2020

inferred from PubMed ID database lookup

Haplotype block structures show significant variation among populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/16699863

12 December 2020

inferred from PubMed ID database lookup

Hidden Markov models approach to the analysis of array CGH data

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.0020041

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1371/JOURNAL.PCBI.0020041

0 references

DBLP publication ID

journals/ploscb/BeroukhimLPHZGFHMHDRMWSL06

1 reference

DBLP Dataset 2021-01-02

release_qjixb4zilbh5jka67vfiued2ja

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/qjixb4zilbh5jka67vfiued2ja

24 November 2022

mapped directly with Wikidata item

PMC publication ID

1458964

0 references