Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901 (Q21145276)

5 July 2017

title

Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901 (English)

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5 July 2017

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whole genome sequencing

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18

Jonathan A Eisen

Jonathan A

Eisen

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5 July 2017

11

William C Nelson

William C

Nelson

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5 July 2017

Martin Wu

1

Martin

Wu

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17 August 2022

Frank T Robb

17

Frank T

Robb

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17 August 2022

Igor B Zhulin

16

Igor B

Zhulin

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17 August 2022

Juan M Gonzalez

15

Juan M

Gonzalez

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17 August 2022

9

James F Kolonay

James F

Kolonay

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5 July 2017

10

Daniel H Haft

Daniel H

Haft

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5 July 2017

5

Lauren M Brinkac

Lauren M

Brinkac

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5 July 2017

4

Sean C Daugherty

Sean C

Daugherty

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5 July 2017

6

Robert J Dodson

Robert J

Dodson

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5 July 2017

3

A Scott Durkin

A Scott

Durkin

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5 July 2017

7

Ramana Madupu

Ramana

Madupu

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5 July 2017

2

Qinghu Ren

Qinghu

Ren

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5 July 2017

8

Steven A Sullivan

Steven A

Sullivan

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5 July 2017

Luke J Tallon

12

Luke J

Tallon

1 reference

5 July 2017

Kristine M Jones

series ordinal

13

author given names

Kristine M

author last names

Jones

1 reference

5 July 2017

Luke E Ulrich

series ordinal

14

author given names

Luke E

author last names

Ulrich

1 reference

5 July 2017

language of work or name

English

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publication date

25 November 2005

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5 July 2017

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5 July 2017

volume

1

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5 July 2017

issue

5

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5 July 2017

page(s)

e65

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Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism

5 July 2017

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19 March 2017

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19 March 2017

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Crystal structure of a carbon monoxide dehydrogenase reveals a [Ni-4Fe-5S] cluster

19 March 2017

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Channeling of carbon monoxide during anaerobic carbon dioxide fixation

19 March 2017

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Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

19 March 2017

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REPuter: the manifold applications of repeat analysis on a genomic scale

7 April 2017

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PAS domains: internal sensors of oxygen, redox potential, and light

7 April 2017

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One-component systems dominate signal transduction in prokaryotes

7 April 2017

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Life with carbon monoxide

12 September 2017

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Novel physiological features of Carboxydothermus hydrogenoformans and Thermoterrabacterium ferrireducens

12 September 2017

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Rubrerythrin from the hyperthermophilic archaeon Pyrococcus furiosus is a rubredoxin-dependent, iron-containing peroxidase

12 September 2017

1 reference

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Thermosinus carboxydivorans gen. nov., sp. nov., a new anaerobic, thermophilic, carbon-monoxide-oxidizing, hydrogenogenic bacterium from a hot pool of Yellowstone National Park.

12 September 2017

1 reference

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Sporulation genes in members of the low G C Gram-type-positive phylogenetic branch ( Firmicutes).

12 September 2017

1 reference

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The Spo0A regulon of Bacillus subtilis

12 September 2017

1 reference

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Genus-specific protein binding to the large clusters of DNA repeats (short regularly spaced repeats) present in Sulfolobus genomes

12 September 2017

1 reference

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Carboxydocella thermautotrophica gen. nov., sp. nov., a novel anaerobic, CO-utilizing thermophile from a Kamchatkan hot spring

12 September 2017

1 reference

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Purification and catalytic properties of a CO-oxidizing:H2-evolving enzyme complex from Carboxydothermus hydrogenoformans

12 September 2017

1 reference

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Is there a role for replication fork asymmetry in the distribution of genes in bacterial genomes?

12 September 2017

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Phylogenetic analysis and gene functional predictions: phylogenomics in action

12 September 2017

1 reference

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Superoxide reductase: fact or fiction?

12 September 2017

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Role of rubrerythrin in the oxidative stress response of Porphyromonas gingivalis

12 September 2017

1 reference

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Two essential DNA polymerases at the bacterial replication fork.

12 September 2017

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Two membrane-associated NiFeS-carbon monoxide dehydrogenases from the anaerobic carbon-monoxide-utilizing eubacterium Carboxydothermus hydrogenoformans

12 September 2017

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Carboxydobrachium pacificum gen. nov., sp. nov., a new anaerobic, thermophilic, CO-utilizing marine bacterium from Okinawa Trough

12 September 2017

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Putative sigma factor SigI (YkoZ) of Bacillus subtilis is induced by heat shock

12 September 2017

1 reference

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Symbiobacterium thermophilum gen. nov., sp. nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth

12 September 2017

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Programmed translational frameshifting.

12 September 2017

1 reference

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Characterization of the region encoding the CO-induced hydrogenase of Rhodospirillum rubrum

12 September 2017

1 reference

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Long stretches of short tandem repeats are present in the largest replicons of the Archaea Haloferax mediterranei and Haloferax volcanii and could be involved in replicon partitioning

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

Cloning and expression of the gene cluster encoding key proteins involved in acetyl-CoA synthesis in Clostridium thermoaceticum: CO dehydrogenase, the corrinoid/Fe-S protein, and methyltransferase

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

A complete sequence of the T. tengcongensis genome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

Role of superoxide dismutase activity in the physiology of Porphyromonas gingivalis.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

Molecular characterization of the gene cluster coxMSL encoding the molybdenum-containing carbon monoxide dehydrogenase of Oligotropha carboxidovorans

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

When polymerases collide: replication and the transcriptional organization of the E. coli chromosome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

Molecular genetics of sporulation in Bacillus subtilis.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

Head-on collision between a DNA replication apparatus and RNA polymerase transcription complex

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.

30 May 2018

1 reference

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Sequenced strains must be saved from extinction

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

Genetic analysis of Carboxydothermus hydrogenoformans carbon monoxide dehydrogenase genes cooF and cooS.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287953

A twisted tale: the origin and evolution of motility and chemotaxis in prokaryotes

29 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/16311624

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Nickel-Containing Carbon Monoxide Dehydrogenase/Acetyl-CoA Synthase(,)

1 reference

https://pubmed.ncbi.nlm.nih.gov/16311624

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Characterization of a CO-responsive transcriptional activator from Rhodospirillum rubrum

1 reference

https://pubmed.ncbi.nlm.nih.gov/16311624

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.0010065

1 reference

OpenCitations bibliographic resource ID

5 July 2017

3291759

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

5 July 2017

1 reference