🚨 New publication co-authored by Lygature: "Sharing sensitive data in life sciences: An overview of centralised and federated approaches," published in Oxford Journals Briefings in #Bioinformatics The paper is the outcome of a workshop organised by Lygature under the EOSC-Life project. Commenting on the new publication, Lygature Program Manager and co-author, Jan-Willem Boiten said: "Central repositories for data sharing in European research face challenges, especially with sensitive health data. Federated approaches, where data remains at the source, are increasingly preferred. Our paper discusses the key considerations for choosing between central, federated, or hybrid data storage strategies for large-scale European collaborations." 📖 Read the paper here 👉 https://lnkd.in/d5NbeXfM ECRIN (European Clinical Research Infrastructure Network), BBMRI-ERIC, EATRIS, ERINHA, Istituto Mario Negri, Health Data Hub, European Bioinformatics Institute | EMBL-EBI, EBRAINS, eCREAM, ISIDORe, Ilse Custers, Rick van Nuland
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🥁 “Recognized by nearly 50 citations since its publication, this work has significantly contributed to the field of life science by providing a meticulously organized, readily accessible, and freely available dataset of protein clusters.” ‘Clustering the universe of AI-predicted protein structures’ is one of the #SIBRemarkableOutputs 2023 👏This work joins the yearly list of outstanding contributions from SIB Members across Switzerland to the field of #bioinformatics. 👉 Find out more about this and the other outputs: https://lnkd.in/eP4FW9ib #alphafold #proteinsinteractions #Proteinanalysis #Structuralbiology 💡The SIB Remarkable Outputs gather on a shortlist the most outstanding works produced by SIB members each year. These contributions showcase the latest advances in the Swiss bioinformatics field and include innovative solutions to share with the life science community. BioAlps - Swiss Health Valley, ELIXIR, Life Sciences Switzerland (LS2) Luciano Cascione Laurent Falquet Robert Ivánek Charlotte Soneson Patricia Palagi Graf Frederique Lisacek Robert Waterhouse Pedro Beltrao, Seoul National University, ETH Zürich, EMBL, Martin Steinegger
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Check out this conference this April, on bioinformatics and computational biology!
We are excited to announce that the 7th byteMAL conference will return to Maastricht on April 24th, 2024! byteMAL is a conference created by and for early-career researchers in the fields of bioinformatics and systems biomedicine, and aims to provide a networking platform for knowledge and expertise exchange across borders. More information about the conference can be found on https://lnkd.in/emVxxCwa Abtract submission for poster and presentation: https://lnkd.in/eyZtvzZu This year, we have Jildau Bouwman, Senior scientist and Programme Leader for Digital Health Technologie at TNO and Dr Patrick Aloy, ICREA Research Professor and Principal Investigator of the Structural Systems Biology lab at the IRB Barcelona as keynote speakers. Supported by: Universiteitsfonds Limburg, NWO (Dutch Research Council), Department of bioinformatics -BiGCaT, Maastricht Centre for Systems Biology (MaCSBio) and Maastricht University. Organisers: Jarno Koetsier Irene Hemel Daan van Beek Femke Smit Saad Salman Lodhi Aishwarya Iyer #systemsbiology #bioinformatics #computationalbiology
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🥁 “The paper is a significant step forward in terms of understanding the heterogeneous response of different cell states to environmental perturbations. It may impact drug discovery in the future.” ‘Predicting how single cells react to perturbations’ is one of the #SIBRemarkableOutputs 2023 👏 This work joins the yearly list of outstanding contributions from SIB Members across Switzerland to the field of #bioinformatics. 👉 Discover this shortlist of outstanding works: https://lnkd.in/din23W7N #CellOT #MachineLearning 💡 The SIB Remarkable Outputs gather on a shortlist the most outstanding works produced by SIB members each year. These contributions showcase the latest advances in the Swiss bioinformatics field and include innovative solutions to share with the life science community. BioAlps - Swiss Health Valley, ELIXIR, Life Sciences Switzerland (LS2), Luciano Cascione, Laurent Falquet, Robert Ivánek, Charlotte Soneson, Patricia Palagi Graf, Frederique Lisacek, Robert Waterhouse, ETH AI Center, ETH Zürich, University of Zurich, Charlotte Bunne, Gabriele Gut, Stefan Stark, Kjong Lehmann, Jacobo Sarabia del Castillo, Mitch Levesque, Lucas Pelkmans, Andreas Krause, Gunnar Rätsch
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Project Associate 1 at Thukral Lab CSIR-IGIB | Research Associate at N.E.T.A institute | Founder at H.B Energetica
Attended Prof. Morten Meldal's Inspiring Talk at CSIR-IGIB! Hello LinkedIn community, I am thrilled to share that I had the opportunity to attend a captivating talk by the esteemed Professor Morten Meldal (Nobel laureate in Chemistry 2022) at CSIR-IGIB on February 2, 2024. As a Structural Bioinformatician, I found immense inspiration in Prof. Meldal's groundbreaking work, particularly his contributions to the CuACC click reaction and the incorporation of molecular dynamics simulations in his recent projects. Prof. Morten Meldal 's expertise in the CuACC click reaction, a powerful tool for bioconjugation, opens up exciting possibilities in biology. The precision and efficiency of this reaction have far-reaching implications for studying molecular interactions, and beyond. Furthermore, his incorporation of molecular dynamics simulations in recent research is particularly intriguing. The ability to observe and analyze the dynamic behaviour of biomolecules at the atomic level provides invaluable insights for someone like me, working in the realm of structural bioinformatics. It enhances our understanding of biological systems and paves the way for designing targeted experiments and interventions. I am grateful for the opportunity to gain deeper insights into these methodologies and their applications during Prof. Meldal's talk. This event was a remarkable opportunity for knowledge exchange and networking. Kudos to CSIR-IGIB for hosting such impactful sessions, and a big thanks to Prof. Meldal for sharing his expertise! #StructuralBioinformatics #CuACCClickReaction #MolecularDynamics #CSIRIGIB #Bioinformatics #ScienceTalks #ResearchInnovation
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#ICYMI - Last week, Federation of American Societies for Experimental Biology (FASEB) and NIH Office of Data Science Strategy announced the recipients of the 2023 DataWorks! Prize. The 2023 challenge sought to highlight existing lab/team level practices in #datasharing and #datareuse - learn more about the 7️⃣ awardees here: https://lnkd.in/eTPzdics #shoutout to my colleague Emily Ruff for leading this collaboration! 🎉 #FASEB #FASEBDataWorks #datascience #datasciencejourney #datamanagement
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🔬🧪 Revolutionizing Research: Thanks to All Engaged Minds in our Seminar on Cutting-edge Sample Prep – Embracing Innovation with Bucher Biotec! 🚀 A big shoutout to the brilliant minds behind our recent seminar, where we delved into the revolutionary MARS and Singulator instruments, redefining sample preparation in life sciences and biotech. Special thanks to our speakers Dr. Luisa Spisak, PhD and Matthias Vogg, Ph.D. for sharing their expertise at our recent seminar. A heartfelt thank you to the meticulous organizers, Stella Stefanova and Svitlana Malysheva, the Biozentrum, University of Basel and the engaged participants – your passion for advancing research is truly inspiring! Volkan Adak Regula Furrer Lisette van Os Yannik Heyer Alexia Pereda Sedat Dilbaz Pascal Detampel Martina Baraldo Shivani Mansingh 🔹 Samples are the essence of scientific exploration, and their preparation is an art. With MARS(Applied Cells) and Singulator(S2 Genomics), we've transformed this process into a seamless, efficient, and reproducible experience. 🌐 Our innovative technologies not only standardize workflows but also save you valuable time, ensuring superior results in downstream analysis. 📈 Elevate your research game, simplify your work life, and stand out in the industry. 🌟 Don't miss out on the chance to experience the future of sample preparation! 🚀 Ready to take the leap? Let's revolutionize your research together. 🌐 #bucherbiotec #s2genomics #appliedcells #lifesciences #research #InnovateWithBucher #ScientificRevolution #Swiss 🇨🇭
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Last week the preprint of the Rapamycin bioavailability study was published and it was a very interesting paper which took a first look at the difference between bioavailability between generic and compounded Rapamycin. A rough summary is that around 5 mg of generic Rapamycin seems to be equal to 15 mg compounded. We know from different studies that Rapamycin blood levels differ between individuals and this study is also aligned with that. This is one reason for measuring Rapamycin blood levels. One very interesting next step in research would be to try to find the Rapamycin blood levels which are commonly associated with beneficial effects but also side effects. In the comment section you can find a link to a recent webinar where the science team from AgelessRx go through the paper. It was an honor to help out and be a co-author of this paper! Really great work by Sajad Zalzala M.D., Girish Harinath and the rest of the AgelessRx team in conducting this study! If you or someone else needs help with other papers around Rapamycin or setting up a trial or something else in the area feel free to contact me and I will try to help out as much as I can.
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Discover the biology of disease with Peter van der Spek “It is very important that things that are being discovered in academics are being converted into business.” Kadans Science Partner highlights the critical role of collaboration in the Behind the Science interview with Peter J. van der Spek. The collaboration between companies, research and knowledge institutions, and the government are the things that make Rotterdam a breeding ground for the many medical innovations that are developed here and find their way to patients worldwide. Professor in Bioinformatics at Erasmus MC, Peter van der Spek, knows firsthand the importance of collaboration in advancing medical research. Let him convince you to work together. Watch the full interview here: https://lnkd.in/eSnyrEMh #RotterdamGenomics #LifeSciences #DNAResearch #MedicalInnovation #Collaboration
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Join the National Science Foundation (NSF) tomorrow, July 12 at 10:30 a.m. PT for an information session on a new NSF funding opportunity called Privacy-preserving Data Sharing in Practice (PDaSP). The PDaSP program will support use-inspired and translational research projects focused on developing and deploying practical solutions that enable sharing and/or using data in a privacy-preserving manner. https://lnkd.in/gzZNCy85
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𝗧𝗵𝗲 𝗢𝗿𝗴𝗮𝗻𝗶𝘀𝗶𝗻𝗴 𝗖𝗼𝗺𝗺𝗶𝘁𝘁𝗲𝗲 𝗰𝗼𝗿𝗱𝗶𝗮𝗹𝗹𝘆 𝗶𝗻𝘃𝗶𝘁𝗲𝘀 𝘆𝗼𝘂 𝘁𝗼 𝘀𝘂𝗯𝗺𝗶𝘁 𝗮𝗻 𝗮𝗯𝘀𝘁𝗿𝗮𝗰𝘁 𝗳𝗼𝗿 𝘁𝗵𝗲 𝘂𝗽𝗰𝗼𝗺𝗶𝗻𝗴 𝗕𝗶𝗼𝗚𝗘𝗡𝗲𝘅𝘁: 𝗡𝗲𝘅𝘁 𝗚𝗲𝗻𝗲𝗿𝗮𝘁𝗶𝗼𝗻 𝗕𝗶𝗼𝘁𝗵𝗲𝗿𝗮𝗽𝘆 𝗖𝗼𝗻𝗳𝗲𝗿𝗲𝗻𝗰𝗲. Important deadlines: Early Bird Abstract Submission Deadline: 𝟮𝟬 𝗠𝗮𝘆, 𝟮𝟬𝟮𝟰 Regular Abstract Submission Deadline: 𝟭𝟳 𝗝𝘂𝗻𝗲, 𝟮𝟬𝟮𝟰 🎁Participants who submit their abstracts during the early bird period will receive a surprise BioGENext Conference branded gift from the organisers. 𝗦𝗼 𝗱𝗼𝗻'𝘁 𝘄𝗮𝗶𝘁 - 𝘀𝘂𝗯𝗺𝗶𝘁 𝗮𝗻𝗱 𝘀𝗲𝗰𝘂𝗿𝗲 𝘆𝗼𝘂𝗿 𝗴𝗶𝗳𝘁! Abstracts can be submitted in two formats: ✔️Virtual poster only ✔️Virtual Poster along with a short 5-minute talk during a dedicated Flash Talk session. All abstracts will be reviewed by the Scientific Committee and selected for publication in the open access, peer-reviewed international journal "Biopolymers and Cell". 📢Important notice: All abstracts will be checked for plagiarism. Evaluation results will be communicated via email 2-3 weeks after the submission deadline. Get all the details and submit your abstract on our website: https://lnkd.in/dRMKAMWX 𝗪𝗲 𝗹𝗼𝗼𝗸 𝗳𝗼𝗿𝘄𝗮𝗿𝗱 𝘁𝗼 𝘆𝗼𝘂𝗿 𝗲𝘅𝗰𝗶𝘁𝗶𝗻𝗴 𝗿𝗲𝘀𝗲𝗮𝗿𝗰𝗵! Follow us on social media using the hashtags #BioGENext #BioGENext2024 #BiogenextConference #ScientificConference #Research #Biotech #Ukraine #biotherapeutics #mRNA #GenEditing #bioinformatics #biomarkers #BiomedicalResearch #Innovation #Collaboration #Science #TherapyDevelopment #Сonference #Biotherapy #Abstractsubmission #Research #Conference
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