Package: lastz / 1.04.03-4

Metadata

Package Version Patches format
lastz 1.04.03-4 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
propagate_cflags.patch | (download)

src/Makefile | 8 4 4 - 0 !
1 file changed, 4 insertions( ), 4 deletions(-)

 propagate deb_cflags_maint_append  = -wno-stringop-truncation
 Also LDFLAGS is added to propagate remaining hardening options


2to3.patch | (download)

tools/any_to_qdna.py | 8 4 4 - 0 !
tools/axt_compare.py | 12 6 6 - 0 !
tools/build_fasta_hsx.py | 49 25 24 - 0 !
tools/expand_scores_file.py | 16 8 8 - 0 !
tools/fasta_fragments.py | 14 7 7 - 0 !
tools/fasta_softmask_intervals.py | 8 4 4 - 0 !
tools/gfa_compare.py | 14 7 7 - 0 !
tools/hassock_hash.py | 6 3 3 - 0 !
tools/hsx_file.py | 38 19 19 - 0 !
tools/install_py.py | 12 6 6 - 0 !
tools/lav_compare.py | 20 10 10 - 0 !
tools/lav_sort.py | 8 4 4 - 0 !
tools/maf_sort.py | 8 4 4 - 0 !
tools/merge_masking_intervals.py | 6 3 3 - 0 !
tools/pick_from_fasta_hsx.py | 10 5 5 - 0 !
tools/probabilities_to_scores.py | 50 25 25 - 0 !
tools/qcode_to_scores.py | 36 18 18 - 0 !
17 files changed, 158 insertions( ), 157 deletions(-)

 2to3 for test suite


fix_signed_char.patch | (download)

src/sequences.c | 16 8 8 - 0 !
1 file changed, 8 insertions( ), 8 deletions(-)

 fix build issue on a couple of architectures
 Comparison with EOF needs to enable signed values
spelling.patch | (download)

src/dna_utilities.c | 2 1 1 - 0 !
src/lastz.c | 4 2 2 - 0 !
2 files changed, 3 insertions( ), 3 deletions(-)

 fix spelling