Bacteria

Bacteria (singular: bacterium) are very small organisms. They are prokaryotic microorganisms.

Bacteria Temporal range: Archean or earlier – present Had'n Archean Proterozoic Pha.
Scanning electron micrograph of Escherichia coli rods
Scientific classification
Domain:	Bacteria Woese, Kandler & Wheelis, 1990
Phyla
Gram positive/no outer membrane Actinobacteria (high-G C) Firmicutes (low-G C) Tenericutes (no wall) Gram negative/outer membrane present Aquificae Bacteroidetes/Fibrobacteres–Chlorobi (FCB group) Chlamydiae Deinococcus-Thermus Fusobacteria Gemmatimonadetes Nitrospirae Planctomycetes–Verrucomicrobia/Chlamydiae (PVC group) Proteobacteria Spirochaetes Synergistetes Unknown/ungrouped Acidobacteria Chloroflexi Chrysiogenetes Cyanobacteria Deferribacteres Dictyoglomi Thermodesulfobacteria Thermotogae
Synonyms
Eubacteria Woese & Fox, 1977

Bacterial cells do not have a nucleus, and most have no organelles with membranes around them. Most have a cell wall. They do have DNA, and their biochemistry is basically the same as other living things. They are amongst the simplest and the oldest organisms.

Almost all bacteria are so tiny they can only be seen through a microscope. Bacteria are made up of one cell, so they are a kind of unicellular organism. They were one of the earliest forms of life, and are simple single-celled organisms. They include extremophiles, which live in extreme habitats.

There are probably more individual bacteria than any other sort of organism on the planet, except viruses. Most bacteria live in the ground or in water, but many live inside or on the skin of other organisms, including humans. There are about as many bacterial cells as human cells in our bodies. Some bacteria cause diseases, but others help us in everyday activities like digesting food (gut flora). Some we use in factories to make cheese and yogurt.

The founder of bacteriology was a German biologist called Ferdinand Cohn (1828–1898). He published the first biological classification of bacteria, based on their appearance.

Reproduction and gene transfer

A bacterium reproduces (creates more bacteria) by dividing in half and creating two "daughter" cells. Each daughter is identical in shape to the parent.

Bacteria do not have sexes, but they do transmit DNA by several kinds of horizontal gene transfer. This is how they share resistance to antibiotics from one strain to another. The complete DNA sequence is known for many bacterial strains. Each bacterium has only one chromosome.

Shape

Bacteria vary widely in size and shape, but in general they are at least ten times larger than viruses. A typical bacterium is about 1 µm (one micrometer) in diameter, so a thousand bacteria lined up would be one millimeter long. There are about five nonillion (5×10³⁰) bacteria on Earth.

Bacteria are identified and grouped by their shapes. Bacilli are rod-shaped, cocci are ball-shaped, spirilla are spiral-shaped, and vibrio are shaped like a comma or a boomerang.

Different shapes of bacteria

Pathogens

Pathogenic bacteria, the harmful kind, enter the human body from the air, water or food. Once inside, these bacteria attach themselves to or invade specific cells in our respiratory system, digestive tract or in any open wound. There they begin to reproduce and spread while using your body's food and nutrients to give them energy to help them reproduce.

Extremophiles

Some bacteria are extremophiles. Some microbes thrive inside rocks up to 580 meters below the sea floor under 2.6 kilometers of ocean off the Pacific Northwest of the United States. According to one of the researchers, "You can find microbes everywhere — they're extremely adaptable to conditions, and survive wherever they are."

Viruses

Viruses were the first and are the most serious enemies of bacteria. Everywhere bacteria are, they get attacked by viruses. The viruses which attack bacteria are called bacteriophages.

Something is now known about how bacteria protect themselves against viruses. Some bacteria and most archaea have CRISPR–Cas systems as an adaptive defence against viruses. These keep sections of viral DNA. These are used to target and destroy later infections by the virus. The process is similar to RNA interference.

History of their classification

All modern ideas start with the sequence analysis of DNA and RNA. In 1987, Carl Woese, the forerunner of the molecular phylogeny revolution, divided bacteria into 11 divisions based on 16S ribosomal RNA (SSU) sequences:

• Proteobacteria: Purple bacteria and their relatives

  Alpha subdivision: purple non-sulfur bacteria, rhizobacteria, Agrobacterium, Bartonella, Rickettsiae, Nitrobacter)

  Beta subdivision: (Rhodocyclus, (some) Thiobacillus, Alcaligenes, Spirillum, Nitrosovibrio

  Gamma subdivision: enterics, fluorescent pseudomonads, purple sulfur bacteria, Legionella, (some) Beggiatoa

  Delta subdivision: Sulfur and sulfate reducers (Desulfovibrio), Myxobacteria, Bdellovibrio

• Gram-positive Eubacteria

  High-G C species - Actinobacteria (Actinomyces, Streptomyces, Arthrobacter, Micrococcus, Bifidobacterium)

  Low-G C species - Firmicutes (Clostridium, Peptococcus, Bacillus, Mycoplasma)

  Photosynthetic species (Heliobacterium)

  Species with gram-negative walls (Megasphaera, Sporomusa)

  Cyanobacteria and chloroplasts (Aphanocapsa, Oscillatoria, Nostoc, Synechococcus, Gleoebacter, Prochloron)

• Spirochaetes and relatives

  Spirochetes (Spirochaeta, Treponema, Borrelia)

  Leptospiras (Leptospira, Leptonema)

• Green sulfur bacteria (Chlorobium, Chloroherpeton)
• Bacteroides, Flavobacteria and relatives

  Bacteroides (Bacteroides, Fusobacterium)

  Flavobacterium group (Flavobacterium, Cytophaga, Saprospira, Flexibacter)

• Planctomyces and relatives

  Planctomyces group (Planctomyces, Pasteuria)

  Thermophiles (Isocystis pallida)

• Chlamydiae (Chlamydia psittaci, Chlamydia trachomatis)
• Radioresistant micrococci and relatives

  Deinococcus group (Deinococcus radiodurans)

  Thermophiles (Thermus aquaticus)

• Green non-sulfur bacteria and relatives

  Chloroflexus group (Chloroflexus, Herpetosiphon)

  Thermomicrobium group (Thermomicrobium roseum)

• Thermotogae

Related pages

• Antibiotics
• Enterococcus
• Mycoplasma
• Microorganism
• Archaea
• Virus