套件：idba（1.1.3-8 以及其他的）

idba 的相關連結

Debian 的資源：

下載原始碼套件 idba：

維護小組：

外部的資源：

主頁 [github.com]

相似套件：

iterative De Bruijn Graph short read assemblers

IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome.

This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time.

IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data.

其他與 idba 有關的套件

依賴

推薦

建議

增強

dep: libc6 (>= 2.34) [除 arm64]

GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb

dep: libc6 (>= 2.38) [arm64]
dep: libgcc-s1 (>= 3.0) [除 armel, armhf, i386, riscv64]

GCC 支援函式庫

dep: libgcc-s1 (>= 3.4) [riscv64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 7) [i386]
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libstdc 6 (>= 11) [除 arm64, riscv64]

GNU Standard C Library v3

dep: libstdc 6 (>= 13.1) [riscv64]

dep: libstdc 6 (>= 14) [arm64]
dep: python3

interactive high-level object-oriented language (default python3 version)

下載 idba

下載可用於所有硬體架構的
硬體架構	版本	套件大小	安裝後大小	檔案
amd64	1.1.3-8	627。6 kB	4，037。0 kB	[檔案列表]
arm64	1.1.3-8 b1	610。1 kB	4，054。0 kB	[檔案列表]
armel	1.1.3-8	565。6 kB	3，793。0 kB	[檔案列表]
armhf	1.1.3-8	575。0 kB	3，089。0 kB	[檔案列表]
i386	1.1.3-8	672。0 kB	4，261。0 kB	[檔案列表]
mips64el	1.1.3-8	644。8 kB	4，896。0 kB	[檔案列表]
ppc64el	1.1.3-8	652。4 kB	4，757。0 kB	[檔案列表]
riscv64	1.1.3-8 b1	635。5 kB	3，458。0 kB	[檔案列表]
s390x	1.1.3-8	599。5 kB	4，293。0 kB	[檔案列表]