原始碼套件:cnvkit(0.9.10-3~0exp0)
cnvkit 的相關連結
Debian 的資源:
維護小組:
- Debian Med Packaging Team (QA 頁面, 郵件存檔)
- Michael R. Crusoe (QA 頁面)
- Steffen Moeller (QA 頁面)
- Olivier Sallou (QA 頁面)
外部的資源:
- 主頁 [cnvkit.readthedocs.org]
試製(Experimental)套件
警告:這個套件來自於 experimental 發行版。這表示它很有可能表現出不穩定或者出現 bug ,甚至是導致資料損失。請務必在使用之前查閱 changelog 以及其他潛在的文件。
本原始碼套件構建了以下這些二進位制包:
- cnvkit
- Copy number variant detection from targeted DNA sequencing
其他與 cnvkit 有關的套件
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- adep: debhelper-compat (= 13)
- 套件暫時不可用
-
- adep: dh-sequence-python3
- 套件暫時不可用
-
- adep: python3-all
- package depending on all supported Python 3 runtime versions
-
- adep: python3-setuptools
- Python3 Distutils Enhancements
-
- adep: pybuild-plugin-pyproject
- Debian helper tools for packaging Python libraries using PEP517
-
- adep: python3-pytest
- Simple, powerful testing in Python3
-
- adep: python3-pyfaidx
- efficient random access to fasta subsequences for Python 3
-
- adep: python3-biopython
- Python3 library for bioinformatics
-
- adep: python3-pandas
- data structures for "relational" or "labeled" data
-
- adep: python3-numpy
- Python library for numerical computations (Python 3)
-
- adep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
-
- adep: python3-scipy
- scientific tools for Python 3
-
- adep: python3-matplotlib
- Python based plotting system in a style similar to Matlab
-
- adep: python3-pomegranate
- Fast, flexible and easy to use probabilistic modelling
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- adep: r-bioc-dnacopy (>= 1.78.0)
- R package: DNA copy number data analysis
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- adep: poppler-utils
- PDF utilities (based on Poppler)
Download cnvkit
檔案 | 大小(單位:kB) | MD5 校驗碼 |
---|---|---|
cnvkit_0.9.10-3~0exp0.dsc | 2。4 kB | a972ab0601e5875fef47fac07f33125e |
cnvkit_0.9.10.orig.tar.gz | 23,108。4 kB | ac1e8d636fc0fc694d1475a212d0cf98 |
cnvkit_0.9.10-3~0exp0.debian.tar.xz | 17。3 kB | d6423a6acc31aea516cf9f337be69c58 |
- Debian 套件原始碼倉庫(VCS:Git)
- https://salsa.debian.org/med-team/cnvkit.git
- Debian 套件原始碼倉庫(可線上瀏覽)
- https://salsa.debian.org/med-team/cnvkit